| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4542437 = | 36 (0.850) | 5 (0.120) | 4/248 | NT | 11.2% | coding (1154/1503 nt) | nhaB | Na(+)/H(+) antiporter NhaB |
| ? | NC_002947 | 4542503 = | 45 (1.110) | coding (1220/1503 nt) | nhaB | Na(+)/H(+) antiporter NhaB | |||||
GCTGTTGGTGGTGTTCTTCGCCGTGGTCGCGGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGCGACGCCGAACGGGCAGGC > NC_002947/4542357‑4542650 | gaaatgctcgcggctcatgctgccatcgagaaatgcctgcttcacttcagtgatgtagatggtggcaacgaacacattgtCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGa > 1:175899‑M1/81‑147 (MQ=255)gaaatgctcgcggctcatgctgccaacgagaaatgcctgcttcacttcagtgatgtagatggtggcaacgaacacattgtCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGa < 2:175899‑M1/67‑1 (MQ=255) cTGTTGGTGGTGTTCTTCGCCGTGGTCGCGGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACaa < 4:75322/149‑1 (MQ=255) gTTGGTGGTGTTCTTCGCCGTGGTCGCGGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAAtg > 6:171512/1‑149 (MQ=255) tggtgTTCTTCGCCGTGGTCGCGGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTc < 7:52351/149‑1 (MQ=255) tggtgTTCTTCGCCGTGGTCGCGGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTc > 4:83270/1‑149 (MQ=255) ggctcatgctgccatcgagaaatgcctgcttcacttcagtgatgtagatggtggcaacgaacacattggCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGtt > 4:84375‑M1/70‑149 (MQ=255) tcgagaaatgcctgcttcacttcagtgatgtagatggtggcaacgaacacattgtCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGtt > 4:185590‑M1/56‑135 (MQ=255) tcgagaaatgcctgcttcacttcagtgatgtagatggtggcaacgaacacattgtCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGtt < 3:185590‑M1/80‑1 (MQ=255) gcgGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CAc > 4:95059/1‑149 (MQ=255) cgGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACt > 5:271192/1‑149 (MQ=255) cgGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACt < 5:228707/149‑1 (MQ=255) cgGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACt < 5:225052/149‑1 (MQ=255) gTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACtga < 2:147706/149‑1 (MQ=255) atcaGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACtgaagtgaag > 5:227218/1‑149 (MQ=255) atcaGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACtgaagtgaag > 8:10113/1‑149 (MQ=255) tcaGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGc < 8:232399/149‑1 (MQ=255) cTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTtct > 2:215481/1‑149 (MQ=255) cTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTtct > 5:266840/1‑149 (MQ=255) ttCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGa < 7:10113/149‑1 (MQ=255) cccATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATgg > 4:197801/1‑147 (MQ=255) cATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATgtgt > 5:5417/1‑96 (MQ=255) cATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATgtgt < 6:5417/96‑1 (MQ=255) aTTGATAAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGgcagca > 6:198443/1‑149 (MQ=255) aacgaacacattgtcgctgatcgccgacagcaagccgttggccaggtacagcatgcccggttgctgttcggccggcagcgCCAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGcc > 4:84375‑M2/81‑149 (MQ=255) aacgaacacattgtcgctgatcgccgacagcaagccgttggccaggtacagcatgcccggttgctgttcggccggcagcgACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGa > 4:185590‑M2/81‑135 (MQ=255) aacgaacacattgtcgctgatcgccgacagcaagccgttggccaggtacagcatgcccggttgctgttcggccggcagcgACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGa < 3:185590‑M2/55‑1 (MQ=255) aaCTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCcg > 2:52460/1‑149 (MQ=255) aCTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCcgc > 1:78565/1‑149 (MQ=255) tcgctgatcgccgacagcaagccgttggccaggtacagcatgcccggttgctgttcggccggcagcgACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGTTGGCAGCATGAGCCGCGAGCATTTc < 2:175899‑M2/80‑1 (MQ=255) tcgctgatcgccgacagcaagccgttggccaggtacagcatgcccggttgctgttcggccggcagcgACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTc > 1:175899‑M2/68‑147 (MQ=255) gcgcTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCg < 3:83270/148‑1 (MQ=255) GCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGaaa > 3:197801‑M1/1‑149 (MQ=255) ggccgAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTgg < 6:227218/149‑1 (MQ=255) cgAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACATACACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCg < 1:215481/149‑1 (MQ=255) cgAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCgg > 3:37805/1‑149 (MQ=255) gAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGAt < 7:93075/111‑1 (MQ=255) gAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGAt > 8:93075/1‑111 (MQ=255) aCAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTgg < 6:266840/149‑1 (MQ=255) gCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGa < 3:95059/149‑1 (MQ=255) gCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGa < 5:198443/149‑1 (MQ=255) aaCCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGAt > 5:196920/1‑148 (MQ=255) gggCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAaca > 2:119773/1‑149 (MQ=255) aTGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCgg < 6:271192/149‑1 (MQ=255) tGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCAc > 1:241151/1‑148 (MQ=255) cTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCt > 5:9823/1‑149 (MQ=255) cTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCt > 6:245857/1‑149 (MQ=255) gCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGc > 5:202829/1‑148 (MQ=255) gCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGc > 7:248098/1‑148 (MQ=255) aaCGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAg < 4:37805/149‑1 (MQ=255) cTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCt < 3:27676/138‑1 (MQ=255) cTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCt > 4:27676/1‑138 (MQ=255) ttGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGc < 8:248098/149‑1 (MQ=255) gCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGc < 5:171512/147‑1 (MQ=255) tGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGCGACg > 1:5891/1‑149 (MQ=255) tCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGCGACGcc > 4:147336/1‑149 (MQ=255) tCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGCGACGc < 6:196920/148‑1 (MQ=255) gCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGCGACGCCGaa > 7:95670/1‑149 (MQ=255) cgACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGATACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGc < 1:194690‑M2/130‑1 (MQ=255) cgACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGc > 2:194690‑M2/3‑132 (MQ=255) gACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGCGACGCCGAACGGGCAGGc > 5:253229‑M2/2‑149 (MQ=255) | GCTGTTGGTGGTGTTCTTCGCCGTGGTCGCGGTGATTCATCAGCAGCAGCTGTTCAGCCCATTGATCAACTGGGTGCTGGCGCTGCCGGCCGAACAGCAACCGGGCATGCTGTACCTGGCCAACGGCTTGCTGTCGGCGATCAGCGACAATGTGTTCGTTGCCACCATCTACAT‑CACTGAAGTGAAGCAGGCATTTCTCGATGGCAGCATGAGCCGCGAGCATTTCGAAACCCTGGCGGTGGCGATCAACACCGGCACCAACCTGCCAAGCGTGGCGACGCCGAACGGGCAGGC > NC_002947/4542357‑4542650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |