New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4795079	34 (0.810)	3 (0.070)	3/246	NT	8.6%	intergenic (‑101/+5)	PP_4222/pvdH	protein SyrP/diaminobutyrate‑2‑oxoglutarate transaminase
	?	NC_002947	= 4795114	31 (0.770)					coding (1329/1359 nt)	pvdH	diaminobutyrate‑2‑oxoglutarate transaminase

TACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCACTCGCGCTGCACCTTCGGCGCCAAGTCGC  >  NC_002947/4794970‑4795262                                                                                                                                                 |                                                                                                                                                      tACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAgcgc                                                                                                                                                   <  6:260111‑M2/149‑5 (MQ=255) tACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAgcgc                                                                                                                                                   <  5:96220‑M2/149‑5 (MQ=255)     cTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAgcgctg                                                                                                                                                 <  1:157506‑M2/147‑7 (MQ=255)      tCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAg                                                                                                                                              >  4:89355/1‑149 (MQ=255)           tttCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTg                                                                                                                                         <  5:257463/149‑1 (MQ=255)                  aagcgtgtcgacggtctctacggagcctggcgacaCGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAAcc                                                                                                                                  >  2:243384‑M2/36‑149 (MQ=255)                    ccTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAgcgct                                                                                                                                                  <  1:252848‑M2/131‑6 (MQ=255)                    ccTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAgcgct                                                                                                                                                  >  2:252848‑M2/1‑126 (MQ=255)                     cTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCtc                                                                                                                                <  7:90215/148‑1 (MQ=255)                           GCCAGGCTCCGTAGAGACCGTCGACACGCTTGAGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATc                                                                                                                         <  7:46211‑M1/149‑1 (MQ=255)                            acggtctctacggagcctggcgacaCGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCt                                                                                                                        <  1:243384‑M2/124‑1 (MQ=255)                                gCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTc                                                                                                                    <  8:46211/149‑1 (MQ=255)                                    cGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCa                                                                                                                <  2:54033/149‑1 (MQ=255)                                      tAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACt                                                                                                              <  7:6313/149‑1 (MQ=255)                                       agagACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACt                                                                                                              >  5:250226/1‑148 (MQ=255)                                         agaCCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACtgat                                                                                                           <  5:260111/149‑1 (MQ=255)                                           aCCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACtgatga                                                                                                         <  3:20136/149‑1 (MQ=255)                                           aCCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTCGGCAACCTCGTCGATCTGCTCGGCACtgatga                                                                                                         >  3:172708/1‑149 (MQ=255)                                             cGTCGACACGCTTGGGTTGGCGGCCAGCATTGCAGGCAGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATATGCTCGGCACTgatgat                                                                                                        >  2:150353/1‑148 (MQ=255)                                               tCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCaa                                                                                                     >  5:197822/1‑149 (MQ=255)                                                  acaCGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTTAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAAcgg                                                                                                  <  4:171071‑M2/146‑1 (MQ=255)                                                  acaCGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAAcgg                                                                                                  <  4:98521‑M2/146‑1 (MQ=255)                                                   caCGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAAcggc                                                                                                 >  2:240408‑M2/3‑149 (MQ=255)                                                            gTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGaaa                                                                                        <  6:96220/149‑1 (MQ=255)                                                                   gcCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGcacca                                                                                 >  8:235191/1‑149 (MQ=255)                                                                   gcCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGcacca                                                                                 >  8:231653/1‑149 (MQ=255)                                                                       gCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGc                                                                             <  7:231653/149‑1 (MQ=255)                                                                       gCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGc                                                                             <  7:235191/149‑1 (MQ=255)                                                                           tGCAGGCCGGCCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCa                                                                         >  3:153514/1‑149 (MQ=255)                                                                                            aaaCAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTc                                                        >  2:172262/1‑149 (MQ=255)                                                                                              aCAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCa                                                      <  3:89355/149‑1 (MQ=255)                                                                                                aGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAgg                                                    <  4:172708/149‑1 (MQ=255)                                                                                                    gCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCaa                                                           <  5:156282/138‑1 (MQ=255)                                                                                                    gCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCaa                                                           >  6:156282/1‑138 (MQ=255)                                                                                                     cATGCAGCGCGGCGTCAAACGCGTCCTACGGCGGCGGCGACTGCAgcgctgcatgccactgtttgaagcggacggcctgcaaggctggccgccaacccaagcgtgtggacggtcactacggagcctggccacaaggagagcgaaacat                                                <  7:41363‑M2/148‑104 (MQ=255)                                                                                                           gcgcGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCc‑gcg                                        >  3:87275/1‑149 (MQ=255)                                                                                                              cggcgTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAg                                                     >  3:147132/1‑134 (MQ=255)                                                                                                              cggcgTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAg                                                     <  4:147132/134‑1 (MQ=255)                                                                                                               ggcgTCAAACGCTGCCTACGGCGGCGGCGACTGCAgcgctgcatgccactgtttgacgcggtcggcctgcaaggctggccgccaacccaagcgtgtcgacggtctctacggagcctggcgacaaggagagcgaaacatgagt                                            <  4:54335‑M2/142‑108 (MQ=255)                                                                                                               ggcgTCAAACGCTGCCTACGGCGGCGGCGACTGCAgcgctgcatgccactgtttgacgcggtcggcctgcaaggctggccgccaacccaagcgtgtcgacggtctctacggagcctggcgacaaggagagcgaaacatgagt                                            >  3:54335‑M2/1‑35 (MQ=255)                                                                                                                     aaaCGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCAc                              <  1:240408/149‑1 (MQ=255)                                                                                                                             ccTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGTCAACCTCGTTGAGCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCACTCGCGCTg                      <  6:197822/149‑1 (MQ=255)                                                                                                                              cTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCACTCGCGCTg                      >  7:133391/1‑148 (MQ=255)                                                                                                                                         gcgACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCACTCGCGCTGCACCTTCGgcgc          >  2:6700/1‑149 (MQ=255)                                                                                                                                           gACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCCTGCGCTTGAGGCACTCGCGCTGCACCTTCGGCGcc         <  1:172262/149‑1 (MQ=255)                                                                                                                                            aCTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCACTCGCGCTGCACCTTCGGCGcc         >  4:222957/1‑147 (MQ=255)                                                                                                                                             cttcAGCGCTGAAGCGCTTGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGACGCACTCGCGCTGCACCTTCGGCGCCAAg      <  1:150353/146‑1 (MQ=255)                                                                                                                                                 aGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCACTCGCGCTGCACCTTCGGCGCCAAGTcgc  >  3:46747/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                      TACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCGGCGTCAAACGCTGCCTACGGCGGCGGCGACTGCAGCGCTGAAGCGCTGGGCAACCTCGTCGATCTGCTCGGCACTGATGATCAACGGCGGCAGGAAACGCACCACCGCCCCATGCCGCCCACCCAACTCCAGGATCAGCCC‑GCGCTTGAGGCACTCGCGCTGCACCTTCGGCGCCAAGTCGC  >  NC_002947/4794970‑4795262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.