New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5520860	38 (0.900)	4 (0.100)	4/248	NT	9.6%	coding (926/948 nt)	lip	lipase
	?	NC_002947	= 5520889	39 (0.960)					coding (897/948 nt)	lip	lipase

TGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCTTTTCCTTGATGAA  >  NC_002947/5520757‑5521032                                                                                                                                     |                                                                                                                                                tGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGc                                                                                                                                 >  3:209823/1‑149 (MQ=255)   gTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCACGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGcc                                                                                                                                >  2:246210/1‑148 (MQ=255)    tCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCa                                                                                                                              >  3:233025/1‑149 (MQ=255)          gcTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCAc                                                                                                                        <  5:33120/149‑1 (MQ=255)           cTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCAcc                                                                                                                       <  2:212703/149‑1 (MQ=255)              gCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAg                                                                                                                    >  4:98246/1‑149 (MQ=255)               ctcaCCTAGCCCGCCGAAGTCCTGCCCGAACGCTGCACCACGCATATCCTCGGACAAGGCACTTGAGCTAATGCCCCGCCGCCTTGAGCCGGGCTGCATCTTCGGTGCACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGc                                                                                                                   <  4:59523/146‑1 (MQ=255)                    cTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTg                                                                                                              >  5:41851/1‑149 (MQ=255)                      tGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGt                                                                                                            >  5:230528/1‑149 (MQ=255)                        gCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCATGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGtt                                                                                                           <  1:246210/148‑1 (MQ=255)                         ccGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGa                                                                                                         <  6:41851/149‑1 (MQ=255)                                        ccGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGAt                                                                                          <  4:209823/149‑1 (MQ=255)                                         cGAACGCTGGACCACTCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTTCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATc                                                                                         <  3:149492/149‑1 (MQ=255)                                          gAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCAGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATc                                                                                         >  6:54343/1‑148 (MQ=255)                                                     cACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAAtc                                                                             <  6:94664/149‑1 (MQ=255)                                                     cACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAAtc                                                                             >  5:94664/1‑149 (MQ=255)                                                        gCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCTGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAAtcgtc                                                                          <  5:54343/149‑1 (MQ=255)                                                              ccgccgCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGAt                                                                    >  4:214127/1‑149 (MQ=255)                                                                gccgccAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGCCTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCa                                                                  >  6:247420/1‑149 (MQ=255)                                                                  cgccAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCAcc                                                                >  1:3442/1‑149 (MQ=255)                                                                         gCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCa                                                         <  3:11897/149‑1 (MQ=255)                                                                            cTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGt                                                      <  6:230528/149‑1 (MQ=255)                                                                                aGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGa                                                  <  2:140226/149‑1 (MQ=255)                                                                                  cTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAAc                                                <  3:214127/149‑1 (MQ=255)                                                                                        ccccGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAAc                                          <  2:3442/149‑1 (MQ=255)                                                                                        ccccGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAAc                                          <  2:20903/149‑1 (MQ=255)                                                                                          ccgccgCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCggg                                                                                  <  3:190776/107‑1 (MQ=255)                                                                                          ccgccgCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCggg                                                                                  >  4:190776/1‑107 (MQ=255)                                                                                            gccgccTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAggctcaaggcggcggggctttagctcaagtgccttggcggcggatcggcgtggtccagcgttcggccagcactacgccggccaaggtcagcaagccgccgaccaggt                                      <  5:124127‑M2/149‑108 (MQ=255)                                                                                              cgccTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGa                                    <  4:233025/149‑1 (MQ=255)                                                                                                ccTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAggctcaaggcggcggggctttagctcaagtgccttggcggcggatcggcgtggtccagcgttcggccagcactacgccggccaaggtcagcaagccgccgaccaggtggt                                   <  5:264555‑M2/148‑111 (MQ=255)                                                                                                  ttGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAggctcaaggcggcggggctttagctcaagtgccttggcggcgg                                                                                                      <  5:120427‑M2/79‑44 (MQ=255)                                                                                                  ttGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAggctcaaggcggcggggctttagctcaagtgccttggcggcgg                                                                                                      >  6:120427‑M2/1‑36 (MQ=255)                                                                                                                  gTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGccc                >  4:160275/1‑149 (MQ=255)                                                                                                                      ggggAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCttt             <  6:241535/145‑1 (MQ=255)                                                                                                                      ggTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCttt             <  3:160275/148‑1 (MQ=255)                                                                                                                          aaCAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCTTTTCCtt        <  4:134790/149‑1 (MQ=255)                                                                                                                            cAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCTTTTCCTtga      <  1:228941/149‑1 (MQ=255)                                                                                                                              gCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGcccc                                                          <  6:187656/95‑1 (MQ=255)                                                                                                                              gCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGcccc                                                          >  5:187656/1‑95 (MQ=255)                                                                                                                              gCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCTTTTcc          <  1:141472/143‑1 (MQ=255)                                                                                                                              gCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCTTTTcc          >  2:141472/1‑143 (MQ=255)                                                                                                                                cGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCTTTTCCTTGATGaa  <  3:98246/149‑1 (MQ=255)                                                                                                                                     |                                                                                                                                                TGGTCGGCGGCTTGCTGACCTTGGCCGGCGTAGTGCTGGCCGAACGCTGGACCACGCCGATCCGCCGCCAAGGCACTTGAGCTAAAGCCCCGCCGCCTTGAGCCGGGCTGCATGTTCGGTGAACAGCCGCACAGGCTCCGCGCCTTTGCCCACGGCACCGAGCGACTGGTTGACGATGTCCAGGTGATCGAGCGGGTAATCGTCGCCGATCACCTGCCCCAGGTGCGAACTGAAACGCCCGACCATGCCGTCGCAATGGCCCTTTTCCTTGATGAA  >  NC_002947/5520757‑5521032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.