New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6172767 =45 (1.070)4 (0.100) 4/236 NT 7.3% coding (315/777 nt) PP_5410 DeoR family transcriptional regulator
?NC_002947 6172834 = 61 (1.580)coding (248/777 nt) PP_5410 DeoR family transcriptional regulator

CAGATTGCACGGGCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAGGTCTTTGCGAATGGTCACTTCCGAGGT  >  NC_002947/6172693‑6172982
                                                                                                                                             |                                                                                                                                                     
cAGATTGCACGGGCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCa                                                                                                                                                  >  8:58921/1‑147 (MQ=255)
cAGATTGCACGGGCCACATTGAGCGAATTGGGCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCa                                                                                                                                                  <  7:58921/147‑1 (MQ=255)
    ttGCACGGGCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGc                                                                                                                                             <  8:13583/148‑1 (MQ=255)
    atGCACGGGCCACATTGAGCGAATAGGACATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGcc                                                                                                                                           <  8:181298/148‑1 (MQ=255)
     tGCACGGGCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCt                                                                                                                                          >  5:228550/1‑149 (MQ=255)
        aCGGGCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCtttt                                                                                                                                       >  6:133185/1‑149 (MQ=255)
            gCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTtata                                                                                                                                   <  6:100777/149‑1 (MQ=255)
            gCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTta                                                                                                                                     >  5:94753/1‑147 (MQ=255)
            gCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTta                                                                                                                                     >  3:113435/1‑147 (MQ=255)
            gCCACATTGAGCGAATTGGTCATCACCACCAGGCCTCGCTGGCGCCCCAGTTCGGCGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCAACGGCGGCACGCGCAATGGCCTTTTta                                                                                                                                     >  6:10996/1‑147 (MQ=255)
              gacaTTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAg                                                                                                                                  >  6:51962/2‑148 (MQ=255)
                   tGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGaa                                                                                                                               >  8:20270/1‑146 (MQ=255)
                    gAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAgaga                                                                                                                           >  8:136222/1‑149 (MQ=255)
                              gTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGGCGCTGTCGATGATAATGAGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGc                                                                                                                 >  5:188099/1‑149 (MQ=255)
                               tcatcaCCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGcc                                                                                                                >  3:122982/1‑149 (MQ=255)
                                 atcaCCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCgg                                                                                                              <  6:228550/149‑1 (MQ=255)
                                 atcaCCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCgg                                                                                                              >  2:83453/1‑149 (MQ=255)
                                      caccaGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAAt                                                                                                                                                <  1:125060/111‑1 (MQ=255)
                                      caccaGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAAt                                                                                                                                                >  2:125060/1‑111 (MQ=255)
                                      caccaGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCAc                                                                                                         >  1:99726/1‑149 (MQ=255)
                                          aGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAg                                                                                                     <  8:133031/149‑1 (MQ=255)
                                            gCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGc                                                                                                    >  4:222704/1‑148 (MQ=255)
                                              ctggctggCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCACAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAAc                                                                                                 <  5:17268/149‑1 (MQ=255)
                                                     gcgcCCCAGTTCGGGGATAATTGCCGACGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGACGGTTCACCGAGCAACTCTTGc                                                                                           <  2:211217/148‑1 (MQ=255)
                                                         cccAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGAAATGGCCTTTTTATAGGAAGAGACGGGTTGTGACGGTTCACCGAGCAACTCTTGCGGTAc                                                                                      <  1:7829/149‑1 (MQ=255)
                                                          ccAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGtt                                                                                                                     <  8:66397/117‑1 (MQ=255)
                                                          ccAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGtt                                                                                                                     >  7:66397/1‑117 (MQ=255)
                                                          ccAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTAcc                                                                                     <  5:10996/149‑1 (MQ=255)
                                                           cAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCg                                                                                    >  7:141568/1‑149 (MQ=255)
                                                           cAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCg                                                                                    >  7:219672/1‑149 (MQ=255)
                                                           cAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCg                                                                                    >  2:263272/1‑149 (MQ=255)
                                                             gTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGc                                                                                  <  1:263272/149‑1 (MQ=255)
                                                             gTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGc                                                                                  <  3:165349/149‑1 (MQ=255)
                                                                 ggggATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAg                                                                              <  6:94753/149‑1 (MQ=255)
                                                                      tCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGcacca                                                                         <  4:122982/149‑1 (MQ=255)
                                                                        aTTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGcaccac                                                                        <  5:92961/148‑1 (MQ=255)
                                                                            CCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACTTTGGCACGCGCAATTTCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAg                                                                   >  1:83453‑M1/1‑149 (MQ=255)
                                                                            CCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAg                                                                   <  5:171213‑M1/149‑1 (MQ=255)
                                                                              gccgtggggcgtatccgcgaacatgcgcgcattatcatcgacagcggcagcaccacggcggcaCGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAgcg                                                                 >  5:114539‑M2/64‑149 (MQ=255)
                                                                                cgtggggcgtatccgcgaacatgcgcgcattatcatcgacagcggcagcaccacggcggcaCGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAgcgg                                                                >  6:204211‑M2/62‑148 (MQ=255)
                                                                                  TGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAgcggcg                                                              <  7:43552‑M1/148‑1 (MQ=255)
                                                                                    GTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGt                                                                     <  7:130226‑M1/139‑1 (MQ=255)
                                                                                    GTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGt                                                                     >  8:130226‑M1/1‑139 (MQ=255)
                                                                                          ccGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTaacaac                                                       <  3:222704/147‑1 (MQ=255)
                                                                                          ccGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAAcaacaa                                                     <  8:141568/149‑1 (MQ=255)
                                                                                          ccGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAAcaacaa                                                     <  4:113435/149‑1 (MQ=255)
                                                                                               gTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGt                                                <  8:43552/149‑1 (MQ=255)
                                                                                                tCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGtt                                               <  5:133185/149‑1 (MQ=255)
                                                                                                tCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGtt                                               >  3:160874/1‑149 (MQ=255)
                                                                                                tCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGt                                                <  6:171213/148‑1 (MQ=255)
                                                                                                gaacatgcgcgcattatcatcgacagcggcagcaccacggcggcaCGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCATAACAACAAGCCGtt                                               <  5:204211‑M2/104‑1 (MQ=255)
                                                                                                  gatgatAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTgg                                             >  1:171/1‑149 (MQ=255)
                                                                                                   ctattattGCGCGCATGTTCGCGTATAGGCCCAACGGGGGAACGGGAAATGTCTCCTTTTAACCACACAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTg                                              <  1:86714/141‑1 (MQ=255)
                                                                                                   atgatAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGt                                            >  2:40569/1‑149 (MQ=255)
                                                                                                    tgatAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGtt                                           <  4:247930/149‑1 (MQ=255)
                                                                                                     gatAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGttt                                          >  2:142500/1‑149 (MQ=255)
                                                                                                      atAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGttt                                          <  1:40569/148‑1 (MQ=255)
                                                                                                        aaTGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTcc                                        >  2:56305/1‑148 (MQ=255)
                                                                                                        aaTGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTcc                                        >  2:77233/1‑148 (MQ=255)
                                                                                                         cgcattatcatcgacagcggcagcaccacggcggcaCGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCaa                                      <  6:114539‑M2/113‑1 (MQ=255)
                                                                                                         aTGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCaa                                      <  1:142500/149‑1 (MQ=255)
                                                                                                         aTGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCaa                                      <  7:136222/149‑1 (MQ=255)
                                                                                                          tGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAg                                     >  2:177924/1‑149 (MQ=255)
                                                                                                            cgcgcATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAgg                                    <  1:56305/148‑1 (MQ=255)
                                                                                                             gcgcATGTTCGCGGATACGCCCCTCGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGcaca                                                                               >  4:211938/1‑104 (MQ=255)
                                                                                                             gcgcATGTTCGCGGATACGCCCCTCGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGcaca                                                                               <  3:211938/104‑1 (MQ=255)
                                                                                                             gcgcATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAAcaacaa                                                     <  4:125423/130‑1 (MQ=255)
                                                                                                               gcATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCCCCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAggcggc                                >  2:186100/1‑149 (MQ=255)
                                                                                                                  tGTTCGCGGATACGCCCCACTGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAg                             <  7:20270/149‑1 (MQ=255)
                                                                                                                  tGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAg                             <  5:51962/149‑1 (MQ=255)
                                                                                                                               gCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTaac                                                          >  4:210909/1‑107 (MQ=255)
                                                                                                                               gCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTaac                                                          <  3:210909/107‑1 (MQ=255)
                                                                                                                                ccccACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCTGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGGTTCCAAGGCGGCGAGGTCATTGCGAATgg               >  7:225045/1‑149 (MQ=255)
                                                                                                                                ccccACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGca                                                                            >  8:187368/1‑88 (MQ=255)
                                                                                                                                  ccacggcggcaCGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAGGTCTTTGCGAATGGt              >  4:253692‑M2/12‑148 (MQ=255)
                                                                                                                                   cacggcggcaCGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAGGTCTTTGCGAATGGTCa            >  6:130973‑M2/11‑149 (MQ=255)
                                                                                                                                      ggcggcaCGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTTGTTTCCAAGGCGGCGAGGTCTTTGCGAATGGTCACtt         <  2:99726‑M2/142‑1 (MQ=255)
                                                                                                                                           aaCGCGCATTGTCATTTTTATAGTAAGAGACGGGTTGTGCCGTTTAACCTTTCAAATATTGCGTTACCGGAACTGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAGGTCTTTGCGAATGGTCACTTCCGAg    <  8:219672‑M2/147‑1 (MQ=255)
                                                                                                                                             cgcgCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAGGTCTTTGCGAATGGTCACTTCCGAGGt  <  3:140563/149‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                     
CAGATTGCACGGGCCACATTGAGCGAATTGGTCATCACCACCAGGCCTGGCTGGCGCCCCAGTTCGGGGATCATTGCCGCCGTGGTGCTGCCGCTGTCGATGATAATGCGCGCATGTTCGCGGATACGCCCCACGGCGGCACGCGCAATGGCCTTTTTATAGGAAGAGACGGGTTGTGCCGGTTCACCGAGCAACTCTTGCGGTACCGGCACAGCACCACCGTAGCGGCGTAACAACAAGCCGTTGGTTTCCAAGGCGGCGAGGTCTTTGCGAATGGTCACTTCCGAGGT  >  NC_002947/6172693‑6172982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.