New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 237802	64 (1.300)	4 (0.090)	4/242	NT	6.0%	coding (683/744 nt)	algR	alginate biosynthesis regulatory protein
	?	NC_002947	= 237820	64 (1.370)					coding (701/744 nt)	algR	alginate biosynthesis regulatory protein

CTGCTTGACGAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/237648‑237802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgaCGGC‑TGACGGTCAAGGCATCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGATGCGCTCGCGGGCGACCAACG‑CATTGCGATGGATGCGCACGAAGCGTTCGCCAAATTCGTCTTCCA  <  NC_002947/237820‑237673                                                                                                                                                                                                                                                                                                                   CTGCTTGACGAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGA                                                                                                                                                              >  4:144441/1‑149    CTTGACGAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGG                                                                                                                                                           >  8:41273/1‑149       GACGAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATG                                                                                                                                                            >  5:130937/1‑145       GACGAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATG                                                                                                                                                            <  6:130937/145‑1          GAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGC                                                                                                                                                          >  5:12824/1‑144          GAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGC                                                                                                                                                          <  6:12824/144‑1                              AGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGACGGC‑TGACGGTCAAGGCATCGC                                                                                                                                 >  2:19969/1‑148                                                          ATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGACGGC‑TGACGGTCAAGGCATCGCCATCCA                                                                                                                           <  3:115061/126‑1                                                          ATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGACGGC‑TGACGGTCAAGGCATCGCCATCCA                                                                                                                           >  4:115061/1‑126                                                                                                                                           AAAGGCCTGGATGGCGATGCCTTGACCGAC‑AGCCGTCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGATGCGCTCGCGGGCGACCAACG‑CATTGCGATGGATGCGCACGAAGCGTTCG                  >  1:19969/1‑149                                                                                                                                                     ATGGCGACGGC‑TGACGGTCAAGGCATCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGA                                                                     >  5:36237/1‑89                                                                                                                                                     ATGGCGACGGC‑TGACGGTCAAGGCATCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGA                                                                     <  6:36237/89‑1                                                                                                                                                      TGGCGACGGC‑TGACGGTCAAGGCATCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGATGCGCTCGCGGGCGACCAACG‑CATTGCGATGGATGCGCACGAAGCGTTCGCCAAATTCGTC       <  2:41270/149‑1                                                                                                                                                        GCGACGGC‑TGACGGTCAAGGCATCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGATGCGCTCGCGGGCGACCATGGACATT‑CGATTGATGCGCACGAAGCGTTCGCCAAATTAGTCT      >  1:263988/1‑148                                                                                                                                                           ACGGC‑TGACGGTCAAGGCATCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGATGCGCTCGCGGGCGACCAACG‑CATTGCGATGGATGCGCACGAAGCGTTCGCCAAATTCGTCTTCCA  <  6:317022/149‑1                                                                                                                                                                                                                                                                                                                   CTGCTTGACGAGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/237648‑237802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgaCGGC‑TGACGGTCAAGGCATCGCCATCCAGGCCTTTCAGATACAGCTGAAAGTGCCCCAGTGGGGTGCGCTGCAAGCGTTCGATGCGCTCGCGGGCGACCAACG‑CATTGCGATGGATGCGCACGAAGCGTTCGCCAAATTCGTCTTCCA  <  NC_002947/237820‑237673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.