New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 237802	64 (1.300)	4 (0.090)	4/242	NT	6.0%	coding (683/744 nt)	algR	alginate biosynthesis regulatory protein
	?	NC_002947	= 237820	64 (1.370)					coding (701/744 nt)	algR	alginate biosynthesis regulatory protein

AGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATG  >  NC_002947/237658‑237949                                                                                                                                                  |                                                                                                                                                     aGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGcc                                                                                                                                                  <  7:102006/149‑1 (MQ=255)     aCTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGa                                                                                                                                              >  6:125607/1‑149 (MQ=255)     aCTCAAAGCCCTGGAAGACGAATATCGCGAACGCTTCGTCCGCATCCATCGCAAAG‑CGTTCGTCGCCCGCGAGCGCAACGAACGCATGCAGCGCACCCCACTCGGGCACTTTCAGCTCTATCTGAAAGGCCTCGATGGCGAAGCCTAGa                                                                                                                                              >  5:305085/1‑149 (MQ=255)         aaaGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGGCCGt                                                                                                                                          >  4:197061/1‑149 (MQ=255)         aaaGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGAcc                                                                                                                                            <  8:123958/147‑1 (MQ=255)         aaaGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGt                                                                                                                                          >  6:202035/1‑149 (MQ=255)         aaaGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGt                                                                                                                                          <  8:101281/149‑1 (MQ=255)           aGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGt                                                                                                                                          >  2:77381/1‑147 (MQ=255)                tGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGt                                                                                                                                  <  6:317022‑M2/149‑2 (MQ=255)                    aGACTAATTTGGCGAACGCTTCGTGCGCATCAATCG‑AATGTCCATGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgc                                                                                                                               >  1:263988‑M2/1‑144 (MQ=255)                    aGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGAcggctgacggtcaaggcatcgc                                                                                                                                >  2:19969‑M1/1‑126 (MQ=255)                     gACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgcca                                                                                                                             <  2:41270‑M2/149‑7 (MQ=255)                               gCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGgt                                                                                                                   <  5:202035/149‑1 (MQ=255)                                cGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGACGGCT‑GTCGGTCAAGGCAtcgccatccaggccttt                                                                                                                  >  1:19969‑M2/1‑132 (MQ=255)                                 gAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGgtgt                                                                                                                 <  6:231803/149‑1 (MQ=255)                                     gCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTgcgc                                                                                                             <  7:41273/149‑1 (MQ=255)                                       ttCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGAcc                                                                                                                                            <  8:222966/117‑1 (MQ=255)                                       ttCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGAcc                                                                                                                                            >  7:222966/1‑117 (MQ=255)                                       ttCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTgcgc                                                                                                             >  5:58427/1‑147 (MQ=255)                                         cGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCaa                                                                                                           <  1:41270/147‑1 (MQ=255)                                              gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                    <  2:158414/149‑1 (MQ=255)                                              gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                    >  6:261673/1‑149 (MQ=255)                                              gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                    <  3:144441/149‑1 (MQ=255)                                              gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCAATGTGGCCGGTGTGCGCAAGatgatg                                                                                                    <  5:125607/149‑1 (MQ=255)                                               catccatcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGc                                                                                                   <  4:266328/149‑1 (MQ=255)                                                atccatcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGAcggctgacggtcaaggcatcgccatcca                                                                                                                          >  4:115061‑M1/1‑98 (MQ=255)                                                atccatcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGAcggctgacggtcaaggcatcgccatcca                                                                                                                          <  3:115061‑M1/126‑29 (MQ=255)                                                   catcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGa                                                                                                <  1:162698/148‑1 (MQ=255)                                                   catcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGAc                                                                                               >  2:197006/1‑149 (MQ=255)                                                        cAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCctct                                                                                          >  8:202887/1‑149 (MQ=255)                                                          aTG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGa                                                                                        <  7:202887/149‑1 (MQ=255)                                                                ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAgg                                                                                      <  6:143112/146‑1 (MQ=255)                                                                ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAgg                                                                                      >  5:143112/1‑146 (MQ=255)                                                                ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGccc                                                                                   <  8:3322/149‑1 (MQ=255)                                                                ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGAAAGATGATGCAGACCCTCTGAGGccc                                                                                   >  1:274429/1‑149 (MQ=255)                                                                   gTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTTTCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTg                                                                                <  5:317022/149‑1 (MQ=255)                                                                      gCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGa                                                                              <  1:121512/148‑1 (MQ=255)                                                                         cgcgAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCg                                                                          <  1:197006/149‑1 (MQ=255)                                                                                  aTCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                    <  3:213194/114‑1 (MQ=255)                                                                                  aTCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                    >  4:213194/1‑114 (MQ=255)                                                                                   tCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccat                                                                                                                            <  6:36237‑M2/89‑8 (MQ=255)                                                                                   tCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccat                                                                                                                            >  5:36237‑M2/1‑82 (MQ=255)                                                                                    cGAACGCTTGCAGCGCACCCCACTGGGGCACTGTCTGGTGTATCTGAAAGGCCTGGCTGGCGATGGCTTGACCGTCA‑TCCGGCGCCATGTGGCCGTTGTGCGCATGATGATGCAGAACCTCTGAGGCCCTTGGACTCGGCCCgcacctg                                                               <  4:226462/149‑1 (MQ=255)                                                                                     gAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCgcacctgc                                                              <  5:261673/149‑1 (MQ=255)                                                                                           ttGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGa                                                        >  7:22436/1‑149 (MQ=255)                                                                                           ttGCAGCGCACCCCACTGGGCCACTTTCAGCTTTATCTGAAAGGCATGGATGCCGATGCATTGAACGTCA‑GCCGTCGACAAGTGGCCGGTGTGCGCAACATGATGCAGACACTCGGAGGCCCTACGACTAGCCCAGCACCTGCACCTGa                                                        >  6:19179/1‑149 (MQ=255)                                                                                             ggaGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGa                                                        <  4:13142/145‑1 (MQ=255)                                                                                              cAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACt                                                      <  6:58427/148‑1 (MQ=255)                                                                                               aGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGccc                                                                      <  2:204758/131‑1 (MQ=255)                                                                                               aGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGccc                                                                      >  1:204758/1‑131 (MQ=255)                                                                                                      cccACTGGGGCACTTTCAGCTGTATCTGAACGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTTAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGAc                                             >  4:30096/1‑149 (MQ=255)                                                                                                      cccACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGAc                                             <  2:274429/149‑1 (MQ=255)                                                                                                      cccACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGAc                                             >  6:145868/1‑149 (MQ=255)                                                                                                          cTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGCTGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGt                                         <  6:305085/149‑1 (MQ=255)                                                                                                             gggCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATg                                               >  8:259391/1‑140 (MQ=255)                                                                                                             gggCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATg                                               <  7:259391/140‑1 (MQ=255)                                                                                                             gggCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGa                                      <  5:318322/149‑1 (MQ=255)                                                                                                               gCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGt                                         >  8:75130/1‑144 (MQ=255)                                                                                                               gCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGt                                         <  7:75130/144‑1 (MQ=255)                                                                                                                     tCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCGAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                              >  6:239065/1‑149 (MQ=255)                                                                                                                          tGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑ACCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGt                                 <  7:248071/141‑1 (MQ=255)                                                                                                                          tGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑ACCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGt                                 >  8:248071/1‑141 (MQ=255)                                                                                                                              tCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGa                     >  1:53558/1‑149 (MQ=255)                                                                                                                                tGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                              >  6:103025/1‑138 (MQ=255)                                                                                                                                tGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                              <  5:103025/138‑1 (MQ=255)                                                                                                                                 gAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATAc                  >  2:301316/1‑149 (MQ=255)                                                                                                                                 gAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACACGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATAc                  >  7:54846/1‑149 (MQ=255)                                                                                                                                  aaaGGCCTGGATGGCGAtgccttgaccgacagccgtcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggatgcgcacgaagcgttcg                  >  1:19969‑M1/1‑17 (MQ=255)                                                                                                                                  aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGt                                                  >  1:138240/1‑116 (MQ=255)                                                                                                                                  aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGt                                                  <  2:138240/116‑1 (MQ=255)                                                                                                                                  aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                              <  5:138040/136‑1 (MQ=255)                                                                                                                                  aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                              >  6:138040/1‑136 (MQ=255)                                                                                                                                  aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATAc                  <  1:77381/148‑1 (MQ=255)                                                                                                                                      gCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGc              >  5:106391/1‑148 (MQ=255)                                                                                                                                        cTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGAt           >  3:58847/1‑149 (MQ=255)                                                                                                                                         tGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggat                                 <  3:115061‑M2/126‑99 (MQ=255)                                                                                                                                         tGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggat                                 >  4:115061‑M2/1‑28 (MQ=255)                                                                                                                                            aTGGCGAcggctgacggtcaaggcatcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcga                                                                    >  5:36237‑M1/1‑7 (MQ=255)                                                                                                                                            aTGGCGAcggctgacggtcaaggcatcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcga                                                                    <  6:36237‑M1/89‑83 (MQ=255)                                                                                                                                             tGGCGAcggctgacggtcaaggcatcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggatgcgcacgaagcgttcgccaaattcgtc       <  2:41270‑M1/149‑144 (MQ=255)                                                                                                                                               gCGAcggctgacggtcaaggcatcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccatggacattcgattgatgcgcacgaagcgttcgccaaattagtct      >  1:263988‑M1/1‑4 (MQ=255)                                                                                                                                               gCGATGCCTTGACCGTCA‑GCCGtcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggatgcgcacgaagcgttcgccaaattcgtct     >  2:19969‑M2/1‑22 (MQ=255)                                                                                                                                               gCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTa    <  6:106391/149‑1 (MQ=255)                                                                                                                                                 gATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTAt   >  6:134201/1‑148 (MQ=255)                                                                                                                                                  acggctgacggtcaaggcatcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggatgcgcacgaagcgttcgccaaattcgtcttcca  <  6:317022‑M1/149‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     AGCCACTCAAAGCCCTGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATG  >  NC_002947/237658‑237949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.