New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 237802	64 (1.300)	4 (0.090)	4/242	NT	6.0%	coding (683/744 nt)	algR	alginate biosynthesis regulatory protein
	?	NC_002947	= 237820	64 (1.370)					coding (701/744 nt)	algR	alginate biosynthesis regulatory protein

TGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACGGTATTTCTCTG  >  NC_002947/237673‑237967                                                                                                                                                      |                                                                                                                                                    tGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGt                                                                                                                                                    <  6:317022‑M2/149‑2 (MQ=255)     aGACTAATTTGGCGAACGCTTCGTGCGCATCAATCG‑AATGTCCATGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgc                                                                                                                                                 >  1:263988‑M2/1‑144 (MQ=255)      gACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgcca                                                                                                                                               <  2:41270‑M2/149‑7 (MQ=255)                gCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGgt                                                                                                                                     <  5:202035/149‑1 (MQ=255)                 cGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGACGGCT‑GTCGGTCAAGGCAtcgccatccaggccttt                                                                                                                                    >  1:19969‑M2/1‑132 (MQ=255)                  gAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGgtgt                                                                                                                                   <  6:231803/149‑1 (MQ=255)                      gCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTgcgc                                                                                                                               <  7:41273/149‑1 (MQ=255)                        ttCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTgcgc                                                                                                                               >  5:58427/1‑147 (MQ=255)                          cGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCaa                                                                                                                             <  1:41270/147‑1 (MQ=255)                               gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                                      >  6:261673/1‑149 (MQ=255)                               gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                                      <  2:158414/149‑1 (MQ=255)                               gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                                      <  3:144441/149‑1 (MQ=255)                               gcATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCAATGTGGCCGGTGTGCGCAAGatgatg                                                                                                                      <  5:125607/149‑1 (MQ=255)                                catccatcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGc                                                                                                                     <  4:266328/149‑1 (MQ=255)                                    catcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGa                                                                                                                  <  1:162698/148‑1 (MQ=255)                                    catcGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGAc                                                                                                                 >  2:197006/1‑149 (MQ=255)                                         cAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCctct                                                                                                            >  8:202887/1‑149 (MQ=255)                                           aTG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGa                                                                                                          <  7:202887/149‑1 (MQ=255)                                                 ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAgg                                                                                                        <  6:143112/146‑1 (MQ=255)                                                 ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAgg                                                                                                        >  5:143112/1‑146 (MQ=255)                                                 ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGccc                                                                                                     <  8:3322/149‑1 (MQ=255)                                                 ttGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGAAAGATGATGCAGACCCTCTGAGGccc                                                                                                     >  1:274429/1‑149 (MQ=255)                                                    gTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTTTCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTg                                                                                                  <  5:317022/149‑1 (MQ=255)                                                       gCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGa                                                                                                <  1:121512/148‑1 (MQ=255)                                                          cgcgAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCg                                                                                            <  1:197006/149‑1 (MQ=255)                                                                   aTCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                                      >  4:213194/1‑114 (MQ=255)                                                                   aTCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGatgatg                                                                                                                      <  3:213194/114‑1 (MQ=255)                                                                    tCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccat                                                                                                                                              >  5:36237‑M2/1‑82 (MQ=255)                                                                    tCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccat                                                                                                                                              <  6:36237‑M2/89‑8 (MQ=255)                                                                     cGAACGCTTGCAGCGCACCCCACTGGGGCACTGTCTGGTGTATCTGAAAGGCCTGGCTGGCGATGGCTTGACCGTCA‑TCCGGCGCCATGTGGCCGTTGTGCGCATGATGATGCAGAACCTCTGAGGCCCTTGGACTCGGCCCgcacctg                                                                                 <  4:226462/149‑1 (MQ=255)                                                                      gAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCgcacctgc                                                                                <  5:261673/149‑1 (MQ=255)                                                                            ttGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGa                                                                          >  7:22436/1‑149 (MQ=255)                                                                            ttGCAGCGCACCCCACTGGGCCACTTTCAGCTTTATCTGAAAGGCATGGATGCCGATGCATTGAACGTCA‑GCCGTCGACAAGTGGCCGGTGTGCGCAACATGATGCAGACACTCGGAGGCCCTACGACTAGCCCAGCACCTGCACCTGa                                                                          >  6:19179/1‑149 (MQ=255)                                                                              ggaGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGa                                                                          <  4:13142/145‑1 (MQ=255)                                                                               cAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACt                                                                        <  6:58427/148‑1 (MQ=255)                                                                                aGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGccc                                                                                        >  1:204758/1‑131 (MQ=255)                                                                                aGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGccc                                                                                        <  2:204758/131‑1 (MQ=255)                                                                                       cccACTGGGGCACTTTCAGCTGTATCTGAACGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTTAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGAc                                                               >  4:30096/1‑149 (MQ=255)                                                                                       cccACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGAc                                                               <  2:274429/149‑1 (MQ=255)                                                                                       cccACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGAc                                                               >  6:145868/1‑149 (MQ=255)                                                                                           cTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGCTGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGt                                                           <  6:305085/149‑1 (MQ=255)                                                                                              gggCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATg                                                                 >  8:259391/1‑140 (MQ=255)                                                                                              gggCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATg                                                                 <  7:259391/140‑1 (MQ=255)                                                                                              gggCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGa                                                        <  5:318322/149‑1 (MQ=255)                                                                                                gCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGt                                                           <  7:75130/144‑1 (MQ=255)                                                                                                gCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGt                                                           >  8:75130/1‑144 (MQ=255)                                                                                                      tCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCGAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                                                >  6:239065/1‑149 (MQ=255)                                                                                                           tGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑ACCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGt                                                   >  8:248071/1‑141 (MQ=255)                                                                                                           tGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑ACCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGt                                                   <  7:248071/141‑1 (MQ=255)                                                                                                               tCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGa                                       >  1:53558/1‑149 (MQ=255)                                                                                                                 tGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                                                >  6:103025/1‑138 (MQ=255)                                                                                                                 tGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                                                <  5:103025/138‑1 (MQ=255)                                                                                                                  gAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATAc                                    >  2:301316/1‑149 (MQ=255)                                                                                                                  gAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACACGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATAc                                    >  7:54846/1‑149 (MQ=255)                                                                                                                   aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGt                                                                    >  1:138240/1‑116 (MQ=255)                                                                                                                   aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGt                                                                    <  2:138240/116‑1 (MQ=255)                                                                                                                   aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                                                <  5:138040/136‑1 (MQ=255)                                                                                                                   aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATc                                                >  6:138040/1‑136 (MQ=255)                                                                                                                   aaaGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATAc                                    <  1:77381/148‑1 (MQ=255)                                                                                                                       gCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGc                                >  5:106391/1‑148 (MQ=255)                                                                                                                         cTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGAt                             >  3:58847/1‑149 (MQ=255)                                                                                                                          tGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggat                                                   >  4:115061‑M2/1‑28 (MQ=255)                                                                                                                          tGGATGGCGATGCCTTGACCGTCA‑GCCGtcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggat                                                   <  3:115061‑M2/126‑99 (MQ=255)                                                                                                                                gCGATGCCTTGACCGTCA‑GCCGtcgccatccaggcctttcagatacagctgaaagtgccccagtggggtgcgctgcaagcgttcgatgcgctcgcgggcgaccaacgcattgcgatggatgcgcacgaagcgttcgccaaattcgtct                       >  2:19969‑M2/1‑22 (MQ=255)                                                                                                                                gCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTa                      <  6:106391/149‑1 (MQ=255)                                                                                                                                  gATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTAt                     >  6:134201/1‑148 (MQ=255)                                                                                                                                       cttttcggTCA‑TCCGTGGACTTGTGTCCGGTGTGCTCAAGATGTTGCAGACCCTCTGAGGCCGTTGGAATCTGCCCGCACGTGCACGTGAGTTCGTATGAGCTGTTGATCCTTATCTGCAAGCGATACCGGCGATGCTGTTATTATCGa               <  5:19179/142‑1 (MQ=255)                                                                                                                                       cTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGa               >  5:65496/1‑149 (MQ=255)                                                                                                                                          gACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGAc              <  2:53558/147‑1 (MQ=255)                                                                                                                                          gACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGAc              <  6:65496/147‑1 (MQ=255)                                                                                                                                          gACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACg             <  5:134201/148‑1 (MQ=255)                                                                                                                                          gACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGAAGATGCAGACCCTCTGAGGCCCTTCGACTCGGCCCGCACCTCCACCTGACTGCGTATCACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACg             >  5:244187/1‑148 (MQ=255)                                                                                                                                             cGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACGGTAt         <  8:54846/149‑1 (MQ=255)                                                                                                                                                   gCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGt                                                   >  8:243693/1‑102 (MQ=255)                                                                                                                                                   gCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGt                                                   <  7:243693/102‑1 (MQ=255)                                                                                                                                                    ccGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACGGTATTTctct   <  8:22436/149‑1 (MQ=255)                                                                                                                                                    ccGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACGGTATTTctct   <  3:30096/149‑1 (MQ=255)                                                                                                                                                     cGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACGGTATTTCTCTg  <  5:145868/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    TGGAAGACGAATTTGGCGAACGCTTCGTGCGCATCCATCGCAATG‑CGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCCCACTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGATGGCGATGCCTTGACCGTCA‑GCCGTCGCCATGTGGCCGGTGTGCGCAAGATGATGCAGACCCTCTGAGGCCCTTGGACTCGGCCCGCACCTGCACCTGACTGCGTATGACCTGTTGATCCGTATCTGCAAGCGATACCGGCGATGCTGTTATGATCGACGGTATTTCTCTG  >  NC_002947/237673‑237967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.