New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 615213	46 (0.930)	3 (0.060)	3/240	NT	6.2%	coding (34/888 nt)	ispA	farnesyl diphosphate synthase
	?	NC_002947	= 615257	48 (1.040)					coding (229/243 nt)	xseB	exodeoxyribonuclease 7 small subunit

TTCGGCCGGGGCGCCCAAGGCTTCGCAGGCCGCGTAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/615058‑615213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgcgGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGAC  <  NC_002947/615257‑615205                                                                                                                                                                                                                   TTCGGCCGGGGCGCCCAAGGCTTCGCAGGCCGCGTAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGT                                                              <  8:50985/149‑1  TCGGCCGGGGCGCCCAAGGCTTCGCAGGCCGCGTAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTC                                                             >  7:341/1‑149    GGCCGGGGCGCCCAAGGCTTCGCAGGCCGCGTAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCG                                                            <  8:203203/148‑1     GCCGGGGCGCCCAAGGCTTCGCAGGCCGCGTAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATAACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGAC                                                          >  2:3391/1‑149      CCGGGGCGCCCAAGGCTTCGCAGGCCGCGTAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACG                                                         >  6:269687/1‑149                                            AACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTT                   >  3:139395/1‑149                                                             GCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGA   <  4:139395/148‑1                                                              CCGCCGTTCATCACGCTGTAGCGCATGGCTGCGTAAAGGCGTTCCAGCTCTTTGCTCGGTGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGTAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGAC  <  3:173207/148‑1                                                                                                                                                                                                                   TTCGGCCGGGGCGCCCAAGGCTTCGCAGGCCGCGTAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/615058‑615213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgcgGAGCCGGAAGCATGATTGGCACCTACCAGGCCAGTTGCCAGGCGCGCGTCGAC  <  NC_002947/615257‑615205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.