New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 853445	47 (0.950)	3 (0.060)	3/244	NT	6.5%	coding (950/1083 nt)	prfA	peptide chain release factor 1
	?	NC_002947	= 853474	42 (0.890)					coding (979/1083 nt)	prfA	peptide chain release factor 1

AACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/853336‑853445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagggTCAGGTTGATGCGGTGATCGGTCACCCGCCCCTGTGGATAATTGTAGGTGCGGATGCGCTCGGAGCGGTCACCGGAACCCACCAGCAGCTTGCGCTCACTGGCAAGGGCGTTCTGCGCGGCACTGGTCTGCATGTCGTTCAGCTTGG  <  NC_002947/853474‑853328                                                                                                                                                                                                                                                                   AACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGTCAGGTTGATGCGGTGATCGGTCACCCGCCCCTGTGGA                                                                                                               <  4:37029/148‑1                                  CTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGTCAGGTTGATGCGGTGATCGGTCACCCGCCCCTGT                                                                                                                  <  6:309926/112‑1                                  CTTGCAAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGTCAGGTTGATGCGGTGATCGGTCACCCGCCCCTGT                                                                                                                  >  5:309926/1‑112                                                                                                            GGGTCAGGTTGATGCGGTGATCGGTCACCCGCCCCTGTGGATAATTGTAGGTGCGGATGCGCTCGGAGCGGTCACCGGAACCCACCAGCAGCTTGCGCTCACTGGCAAGGGCGTTCTGCGCGGCACTGGTCTGCATGTCGTTCAGCTTG   <  6:26438/149‑1                                                                                                             GGTCAGGTTGATGCGGTGATCGGTCACCCGCCCCTGTGGATAATTGTAGGTGCGGATGCGCTCGGAGCGGTCACCGGAACCCACCAGCAGCTTGCGCTCACTGGCAAGGGCGTTCTGCGCGGCACTGGTCTGCATGTCGTTCAGCTTGG  >  8:167007/1‑149                                                                                                                                                                                                                                                                   AACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/853336‑853445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagggTCAGGTTGATGCGGTGATCGGTCACCCGCCCCTGTGGATAATTGTAGGTGCGGATGCGCTCGGAGCGGTCACCGGAACCCACCAGCAGCTTGCGCTCACTGGCAAGGGCGTTCTGCGCGGCACTGGTCTGCATGTCGTTCAGCTTGG  <  NC_002947/853474‑853328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.