New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 85344547 (0.950)3 (0.060) 3/244 NT 6.5% coding (950/1083 nt) prfA peptide chain release factor 1
?NC_002947 = 853474 42 (0.890)coding (979/1083 nt) prfA peptide chain release factor 1

ACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACTGATGACTGTCATCGC  >  NC_002947/853298‑853591
                                                                                                                                                     |                                                                                                                                                   
aCCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAgggg                                                                                                                                                    <  3:235088/149‑1 (MQ=255)
 ccGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGc                                                                                                                                                   <  6:242219/149‑1 (MQ=255)
   gTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCgg                                                                                                                                                 <  2:171776/149‑1 (MQ=255)
   gTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCgg                                                                                                                                                 <  8:8155/149‑1 (MQ=255)
       tCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGa                                                                                                                                             >  5:140773/1‑149 (MQ=255)
              aTGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCa                                                                                                                                      >  2:241574/1‑149 (MQ=255)
              aTGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCa                                                                                                                                      <  5:140201/149‑1 (MQ=255)
                 tCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCAcc                                                                                                                                    <  8:55708/148‑1 (MQ=255)
                   cTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGc                                                                                                                                  <  6:140773/148‑1 (MQ=255)
                   cTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCa                                                                                                                                 >  5:253183/1‑149 (MQ=255)
                          tCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGTGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATGACCGCATCAAc                                                                                                                            <  2:95101/147‑1 (MQ=255)
                          tCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAAc                                                                                                                            <  1:241574/148‑1 (MQ=255)
                             gCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGa                                                                                                                        >  4:235949/1‑148 (MQ=255)
                             gCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGa                                                                                                                        <  3:235949/148‑1 (MQ=255)
                              ccAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGAcc                                                                                                                      >  8:167007‑M2/1‑147 (MQ=255)
                               cAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGAccc                                                                                                                     <  6:26438‑M2/149‑4 (MQ=255)
                                      aaCGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGtcaggttgatgcggtgatcggtcacccgcccctgtgga                                                                                                               <  4:37029‑M1/148‑39 (MQ=255)
                                      aaCGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTAt                                                                                                                <  6:253183/147‑1 (MQ=255)
                                              gCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGAATGGTGGGTTCCGGTGACCGATCCGAGCGCATCCGAACCTCCAATTATCCACAGGGGCGGGTGACCGATCACGGCTTCAACCTGACCATGTATTCGTTGgac                                                                                                       >  1:70834/1‑149 (MQ=255)
                                               cAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGgacg                                                                                                      <  5:43899/148‑1 (MQ=255)
                                                       tGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCa                                                                                             >  2:49958/1‑149 (MQ=255)
                                                        gCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGtt                                                                                                           <  8:106095/134‑1 (MQ=255)
                                                        gCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGtt                                                                                                           >  7:106095/1‑134 (MQ=255)
                                                            cgcAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGt                                                                                        >  8:212498/1‑149 (MQ=255)
                                                                    gCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGa                                                                                >  3:78460/1‑149 (MQ=255)
                                                                      ccTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGCGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGAcg                                                                             >  7:154480/1‑149 (MQ=255)
                                                                       cTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGtcaggttgatgcggtgatcggtcacccgcccctgt                                                                                                                  <  6:309926‑M1/112‑36 (MQ=255)
                                                                       cTTGCAAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGtcaggttgatgcggtgatcggtcacccgcccctgt                                                                                                                  >  5:309926‑M1/1‑77 (MQ=255)
                                                                          gCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGt                                                                         >  6:169716/1‑149 (MQ=255)
                                                                            cAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGtt                                                                                                           <  7:297657/114‑1 (MQ=255)
                                                                            cAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGtt                                                                                                           >  8:297657/1‑114 (MQ=255)
                                                                            cAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGa                                                                       <  2:70834/149‑1 (MQ=255)
                                                                            cAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCCGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGa                                                                       <  5:182811/149‑1 (MQ=255)
                                                                                     cAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCg                                                                                                             >  1:45011/1‑103 (MQ=255)
                                                                                     cAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCg                                                                                                             <  2:45011/103‑1 (MQ=255)
                                                                                          tgctgGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGctgctg                                                         <  8:281852/149‑1 (MQ=255)
                                                                                                  gggTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATTAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGaa                                                   >  8:194847/1‑148 (MQ=255)
                                                                                                     ttCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATAcc                                               <  7:212498/149‑1 (MQ=255)
                                                                                                     ttCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATAc                                                >  2:31106/1‑148 (MQ=255)
                                                                                                        cGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAg                                             <  4:78460/148‑1 (MQ=255)
                                                                                                         ggTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGc                                           <  6:174395/149‑1 (MQ=255)
                                                                                                          gTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACTGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGc                                           <  1:47242/149‑1 (MQ=255)
                                                                                                                    cGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTg                                 <  8:154480/148‑1 (MQ=255)
                                                                                                                     gAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGgc                               >  4:303322/1‑149 (MQ=255)
                                                                                                                               cGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTggg                      <  1:49958/149‑1 (MQ=255)
                                                                                                                                  aCCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGa                   >  1:273344/1‑149 (MQ=255)
                                                                                                                                     tACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACt                 >  6:4381/1‑148 (MQ=255)
                                                                                                                                      aCAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGa                                        >  6:260267/1‑124 (MQ=255)
                                                                                                                                      aCAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGa                                        <  5:260267/124‑1 (MQ=255)
                                                                                                                                       cAATTATCCACAGGGGCGGGTGACCGATCACCGCATTAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACtg                <  7:194847/147‑1 (MQ=255)
                                                                                                                                       cAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACtga               <  3:303322/148‑1 (MQ=255)
                                                                                                                                       cAATNATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACtgat              >  5:87372/1‑149 (MQ=255)
                                                                                                                                          ttATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACTGATGAc           >  8:270699/1‑149 (MQ=255)
                                                                                                                                             tCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGAccctgtggataattgtaggtgcggatgcgctcggagcggtcaccggaacccaccagcagcttgcgctcactggcaagggcgttctgcgcggcactggtctgcatgtcgtt          <  4:37029‑M2/148‑111 (MQ=255)
                                                                                                                                             tCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACTGATGACTg         <  2:273344/148‑1 (MQ=255)
                                                                                                                                               cacaGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGAt                                       >  7:99270/1‑116 (MQ=255)
                                                                                                                                               cacaGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGAt                                       <  8:99270/116‑1 (MQ=255)
                                                                                                                                                acaGGGGCGGGTGACCGATCACCGCATCAACCTGAccctgtggataattgtaggtgcggatgcgctcggagcggtcaccggaacccaccagcagcttgcgctcacttgcaag                                           >  5:309926‑M2/1‑35 (MQ=255)
                                                                                                                                                acaGGGGCGGGTGACCGATCACCGCATCAACCTGAccctgtggataattgtaggtgcggatgcgctcggagcggtcaccggaacccaccagcagcttgcgctcactggcaag                                           <  6:309926‑M2/112‑78 (MQ=255)
                                                                                                                                                 caGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACTGATGACTGTCATc    >  8:175372/1‑149 (MQ=255)
                                                                                                                                                   gggtcaggttgatgcggtgatcggtcacccgcccctgtggataattgtaggtgcggatgcgctcggagcggtcaccggaacccaccagcagcttgcgctcactggcaagggcgttctgcgcggcactggtctgcatgtcgttcagcttg   <  6:26438‑M1/149‑147 (MQ=255)
                                                                                                                                                    ggtcaggttgatgcggtgatcggtcacccgcccctgtggataattgtaggtgcggatgcgctcggagcggtcaccggaacccaccagcagcttgcgctcactggcaagggcgttctgcgcggcactggtctgcatgtcgttcagcttgg  >  8:167007‑M1/1‑2 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
ACCGTGCTCGCGCCATGTCCTGGCTGTCGGCCAAGCTGAACGACATGCAGACCAGTGCCGCGCAGAACGCCCTTGCCAGTGAGCGCAAGCTGCTGGTGGGTTCCGGTGACCGCTCCGAGCGCATCCGCACCTACAATTATCCACAGGGGCGGGTGACCGATCACCGCATCAACCTGACCCTGTATTCGTTGGACGACATCCTCAGCGGTGGCGTAGACGCGGTGATCGAACCGCTGCTGGCCGAATACCAGGCCGATCAACTGGCCGCCTTGGGGGACTGATGACTGTCATCGC  >  NC_002947/853298‑853591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.