New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	958380 =	37 (0.750)	4 (0.090)	4/230	NT	11.4%	intergenic (+27/‑166)	ykgJ/PP_0820	ferredoxin/acetyltransferase
	?	NC_002947	958419 =	29 (0.650)					intergenic (+66/‑127)	ykgJ/PP_0820	ferredoxin/acetyltransferase

TGTCCATTGCTGGGGAGATGACAGTTTAACGTCAAGTGCAGGGTTCAGGCATCTCGGGCAGCTTTGCAGCCCGTCGCCGGCAGGTTCACCACAGGCCAGGAGCCTTGCACGCTACCTGTGGAAGCGGCCCCGCGTCGCAAAAGGCCGCTTCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/958534‑958380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcttccacaGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTT  >  NC_002947/958419‑958565                                                                                                                                                                                                                                                                                                                TGTCCATTGCTGGGGAGATGACAGTTTAACGTCAAGTGCAGGGTTCAGGCATCTCGGGCAGCTTTGCAGCCAGTCGCCGGCAGGTTCACCACAGGCCAGGAGCCTTGCAAGCTACCTGTGGAAGAGGCCCCGCGTCGCAAAATGACGCT                                                                                                                                                           >  1:313768/1‑149       TTGCTGGGGAGATGACAGTTTAACGTCAAGTGCAGGGTTCAGGCATCTCGGGCAGCTTTGCAGCCCGTCGCCGGCAGGTTCACCACAGGCCAGGAGCCTTGCACGCTACCTGTGGAAGCGGCCCCGCGTCGCAAAAGGCCGCTTCCACA                                                                                                                                                     <  5:186611/149‑1       TTGCTGGGGAGATGACAGTTTAACGTCAAGTGCAGGGTTCAGGCATCTCGGGCAGCTTTGCAGCCCGTCGCCGGCAGGTTCACCACAGGCCAGGAGCCTTGCACGCTACCTGTGGAAGCGGCCCCGCGTCGCAAAAGGCCGCTTCCACA                                                                                                                                                     >  5:287851/1‑149                                                                                                                       TGGAAGCGGCCCCGCGTCGCAAAAGGCCGCTTCCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCA                                                                     >  6:253204/1‑117                                                                                                                       TGGAAGCGGCCCCCCGTCGCAAAAGGCCGCTTCCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCA                                                                     <  5:253204/117‑1                                                                                                                         GAAGCGGCCCCGCGTCGCAAAAGGCCGCTTCCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAG                                                                                              >  5:232229/1‑90                                                                                                                         GAAGCGGCCCCGCGTCGCAAAAGGCCGCTTCCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAG                                                                                              <  6:232229/90‑1                                                                                                                                                   GCTTCCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCC         >  3:288196/1‑149                                                                                                                                                       CCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAG     >  8:27874/1‑149                                                                                                                                                       CCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGG                       >  5:111923/1‑131                                                                                                                                                       CCACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGG                       <  6:111923/131‑1                                                                                                                                                        CACAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTATCATCTCCCCAGCAATGGACA                                 <  4:137037/120‑1                                                                                                                                                          CAGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGATGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTT  <  4:157889/149‑1                                                                                                                                                           AGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGA                              <  1:174774/120‑1                                                                                                                                                           AGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGA                              >  2:174774/1‑120                                                                                                                                                                                                                                                                                                                TGTCCATTGCTGGGGAGATGACAGTTTAACGTCAAGTGCAGGGTTCAGGCATCTCGGGCAGCTTTGCAGCCCGTCGCCGGCAGGTTCACCACAGGCCAGGAGCCTTGCACGCTACCTGTGGAAGCGGCCCCGCGTCGCAAAAGGCCGCTTCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/958534‑958380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcttccacaGGTAGCGTGCAAGGCTCCTGGCCTGTGGTGAACCTGCCGGCGACGGGCTGCAAAGCTGCCCGAGATGCCTGAACCCTGCACTTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTT  >  NC_002947/958419‑958565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.