New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 990894 = | 50 (1.010) | 4 (0.090) | 4/244 | NT | 8.5% | coding (775/1143 nt) | PP_0856 | lipoprotein |
? | NC_002947 | 990935 = | 38 (0.810) | coding (816/1143 nt) | PP_0856 | lipoprotein |
CCATGCTGTCGTTGCTCCACAGGGCACTGGAAGAGCGCTCATCCACACTTTCCACGGTACCCGAGGCTTCGCTGACGTAGACGTTACCGAAGCCCTGGGCGACACCCACATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/991047‑990894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccagCTATGTGGGTGTCGCCCAGGGCTTCGGTAACGTCTACGTCAGCGAAGCCTCGGGTACCGTGGAAAGTGTGGATGAGCGCTCTTCCAGTGCCCTGTGGAGCAACGACAGCATGGCTCGCCGCCAGTTGACCGCCCCTGAAGTGTTCA > NC_002947/990935‑991080 CCATGCTGTCGTTGCTCCACAGGGCACTGGAAGAGCGCTCATCCACACTTTCCACGGTACCCGAGGCTTCGCTGACGTAGACGTTACCGAAGCCCTGGGCGACACCCACATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTT > 5:9845/1‑149 TGCTGTCGTTGCTCCACAGGGCACTGGAAGAGCGCTCATCCACACTTTCCACGGTACCCGAGGCTTCGCTGACGTAGACGTTACCGAAGCCCTGGGCGACACCCACATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTC > 8:131723/1‑148 CCACACTTTCCACGGTACCCGAGGCTTCGCTGACGTAGACGTTACCGAAGCCCTGGGCGACACCCACATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTCC > 1:174095/1‑110 CCACACTTTCCACGGTACCCGAGGCTTCGCTGACGTAGACGTTACCGAAGCCCTGGGCGACACCCACATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTCC < 2:174095/110‑1 ATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTCCAGCTATGTGGGTGTCGCCCAGGGCTTCGGTAACGTCTACGTCAGCGAAGCCTCGGGTACCGTGGAAAGTGTGGATGAGCGCTCTTC < 7:94136/129‑1 ATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTCCAGCTATGTGGGTGTCGCCCAGGGCTTCGGTAACGTCTACGTCAGCGAAGCCTCGGGTACCGTGGAAAGTGTGGATGAGCGCTCTTC > 8:94136/1‑129 AGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTCCAGCTATGTGGGTGTCGCCCAGGGCTTCGGTAACGTCTACGTCAGCGAAGCCTCGGGTACCGTGGAAAGTGTGGATGAGCGCTCTTCCAGTGCCCTGTGGAGCAACGA > 8:172895/1‑148 GGCCGCTTTCCAGCTATGTGGGTGTCGCCCAGGGCTTCGGTAACGTCTACGTCAGCGAAGCCTCGGGTACCGTGGAAAGTGTGGATGAGCGCTCTTCCAGTGCCCTGTGGAGCAACGACAGCATGGCTCGCCGCCAGTTGACCGCCCCT < 7:172895/149‑1 CAGCTATGTGGGTGTCGCCCAGGGCTTCGGTAACGTCTACGTCAGCGAAGCCTCGGGTACCGTGGAAAGTGTGGATGAGCGCTCTTCCAGTGCCCTGTGGAGCAACGACAGCATGGCTCGCCGCCAGTTGACCGCCCCTGAAGTGTTCA < 3:213123/149‑1 CCATGCTGTCGTTGCTCCACAGGGCACTGGAAGAGCGCTCATCCACACTTTCCACGGTACCCGAGGCTTCGCTGACGTAGACGTTACCGAAGCCCTGGGCGACACCCACATAGCTGGAAGCATCGCGCTGCCACAGCTCGCGGCCGCTTTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/991047‑990894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccagCTATGTGGGTGTCGCCCAGGGCTTCGGTAACGTCTACGTCAGCGAAGCCTCGGGTACCGTGGAAAGTGTGGATGAGCGCTCTTCCAGTGCCCTGTGGAGCAACGACAGCATGGCTCGCCGCCAGTTGACCGCCCCTGAAGTGTTCA > NC_002947/990935‑991080 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |