New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1452064 =	29 (0.590)	3 (0.060)	3/240	NT	10.3%	coding (226/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter
	?	NC_002947	1452131 =	25 (0.540)					coding (293/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter

TGAAGCGCCGCAGCGAGAAGGTCGTGGCCAGCCACGGCGCAAAGGCCATGGCCGAGACCGAAGCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1452133‑1452064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgctTCACCATGAGCGCAGTGGGTCTGTTCGCCGTGCTTGGCCTGCTGCAGCCGTTCGCCCCCAACCTGCACAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCT  >  NC_002947/1452131‑1452272                                                                                                                                                                                                                      TGAAGCGCCGCAGCGAGAAGGTCGTGGCCAGCCACGGCGCAAAGGCCATGGCCGAGACCGAAGCGGCGCTTCACCATGAGCGCAGTGGGTCTGTTCGCCGTGCTTGGCCTGCTGCAGCCGTTCGCCCCCAACCTGCATAGCCTGATGTT                                                                 >  1:11753/1‑149     GCGCCGCAGCGAGAAGGTCGTGGCCAGCCACGGCGCAAAGGCCATGGCCGAGACCGAAGCGGCGCTTCACCATGAGCGCAGTGGGTCTGTTCGCCGTGCTTGGCCTGCTGCAGCCGTTCGCCCCCAACCTGCACAGCCTGATGTTGCTG                                                             >  5:264712/1‑149                                CCACGGCGCAAAGGCCATGGCCGAGACCGAAGCGGCGCTTCACCATGAGCGCAGTGGGTCTGTTCGCCGTGCTTGGCCTGCTGCAGCCGTTCGCCCCCAACCTGCATAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGC                                  <  2:11753/149‑1                                                                CGGCGCTTCACCATGAGCGCAGTGGGTCTGTTCGCCGTGCTTGGCCTGCTGCAGCCGTTCGCCCCCAACCTGCACAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCT  <  8:284620/149‑1                                                                                                                                                                                                                      TGAAGCGCCGCAGCGAGAAGGTCGTGGCCAGCCACGGCGCAAAGGCCATGGCCGAGACCGAAGCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1452133‑1452064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgctTCACCATGAGCGCAGTGGGTCTGTTCGCCGTGCTTGGCCTGCTGCAGCCGTTCGCCCCCAACCTGCACAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCT  >  NC_002947/1452131‑1452272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.