| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1531447 | 51 (1.030) | 3 (0.060) | 3/248 | NT | 6.6% | coding (429/630 nt) | PP_1344 | hypothetical protein |
| ? | NC_002947 | = 1531499 | 36 (0.750) | coding (377/630 nt) | PP_1344 | hypothetical protein | |||||
TGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1531299‑1531447‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATTGGGCAACCCGCCTGCGCTACCAGCAGAAGCGCTTGTTGGCGGCCCTGCAGGCCATGGAAGCATTCGGCAACCTCAGGCGCATCCTGTACAAGGTACAGCCGCCGCTGGTACCGGCCAAGCGTGGCGGGCATGCGGCCGAGCTTTC < NC_002947/1531499‑1531352 TGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGC < 6:150854/148‑1 GTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATG < 7:37654/138‑1 GTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATG > 8:37654/1‑138 GCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCC < 5:213946/136‑1 GCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCC > 6:213946/1‑136 GAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGACGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCC < 2:83033/96‑1 GAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGACGGCTGTACCGTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCC > 1:83033/1‑96 TCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCCATTGGGCAACCCGCCTGCGCTACCAGCAGAAGCGCTTGTTGGCGGCCCTGCAGGCCATG > 6:320186/1‑149 GGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCCATTGGGCAACCCGCCTGCGCTACCAGCAGAAGCGCTTGTTGGCGGCCCTGCAGGCCATG < 5:320186/147‑1 TGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCCATTGGGCAACCCGCCTGCGCTACCAGCAGAAGCGCTTGTTGGCGGCCCTGCAGGCCATGG < 1:87384/108‑1 CCATTGGGCAACCCGCCTGCGCTACCAGCAGAAGCGCTTGTTGGCGGCCCTGCAGGCCATGGAAGCATTCGGCAACCTCAGGCGCATCCTGTACAAGGTACAGCCGCCGCTGGTACCGGCCAAGCGTGGCGGGCATGCGGCCGAGCTTT < 5:33007/149‑1 CATTGGGCAACCCGCCTGCGCTACCAGCAGAAGCGCTTGTTGGCGGCCCTGCAGGCCATGGAAGCATTCGGCAACCTCAGGCGCATCCTGTACAAGGTACAGCCGCCGCTGGTACCGGCCAAGCGTGGCGGGCATGCGGCCGAGCTTTC > 5:233306/1‑149 TGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTGGCCGGTACCAGCGGCGGCTGTACCTTGTACAGGATGCGCCTGAGGTTGCCGAATGCTTCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1531299‑1531447‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATTGGGCAACCCGCCTGCGCTACCAGCAGAAGCGCTTGTTGGCGGCCCTGCAGGCCATGGAAGCATTCGGCAACCTCAGGCGCATCCTGTACAAGGTACAGCCGCCGCTGGTACCGGCCAAGCGTGGCGGGCATGCGGCCGAGCTTTC < NC_002947/1531499‑1531352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |