| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1638285 = | 43 (0.870) | 3 (0.060) | 3/242 | NT | 7.3% | coding (455/1383 nt) | PP_1437 | heavy metal sensor histidine kinase |
| ? | NC_002947 | 1638341 = | 36 (0.770) | coding (399/1383 nt) | PP_1437 | heavy metal sensor histidine kinase | |||||
CCCTGGAATCGCGGGTCGGTGAACTGCACACCGATGCGCGCCTGGCCTTTCACGCCTGGCGTGACAGCGGCGGTAACCAGATCCTCACCGTTACCCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1638435‑1638285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaccgGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGCGCATCGGTGTGCAGTTCACCGACCCGCGATTCCAGGGCCGGGCCGAGGCTGAGCAGGTGGGGGTGGCGGCCGTCGAGAGCCAGCACACT > NC_002947/1638341‑1638487 CCCTGGAATCGCGGGTCGGTGAACTGCACACCGATGCGCGCCTGGCCTTTCACGCCTGGCGTGACAGCGGCGGTAACCAGATCCTCACCGTTACCCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAAC < 7:64357/149‑1 CCTGGAATCGCGGGTCGGTGAACTGCACACCGATGCGCGCCTGGCCTTTCACGCCTGGCGTGACAGCGGCGGTAACCAGATCCTCACCGTTACCCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACC > 7:240597/1‑149 ACTGCACACCGATGCGCGCCTGGCCTTTCACGCCTGGCGTGACAGCGGCGGTAACCAGATCCTCACCGTTACCCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACC < 5:315211/128‑1 ACTGCACACCGATGCGCGCCTGGCCTTTCACGCCTGGCGTGACAGCGGCGGTAACCAGATCCTCACCGTTACCCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACC > 6:315211/1‑128 TTACCCGGTTGCTGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACCGGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGAGTGAAAGGCCAGGCGCGCATCGGTGTGCAGTTCACCGACCCGCGAT > 8:168992/1‑149 CCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACCGGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGC > 3:227537/1‑115 CCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACCGGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGC < 4:227537/115‑1 AACCGGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGCGCATCGGTGTGCAGTTCACCGACCCGCGATTCCAGGGCCGGGCCGAGGCTGAGCAGGTGGGGGTGGCGGCCGTCGAGAGCCAGCA > 1:20483/1‑148 AACCGGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGCGCATCGGTGTGCAGTTCACCGACCCGCGATTCCAGGGCCGGGCCGAGGCTGAGCAGGTGGGGGTGGCGGCCGTCGAGAGCCAGCA > 2:288401/1‑148 ACCGGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGCGCATCGGTGTGCAGTTCACCGACCCGCGATTCCAGGGCCGGGCCGAGGCTGAGCAGGTGGGGGTGGCGGCCGTCGAGAGCCAGCACA < 2:220883/149‑1 CGGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGCGCATCGGTGTGCAGTTCACCGACCCGCGATTCCAGGGCCGGGCCGAGGCTGAGCAGGTGGGGGTGGCGGCCGTCGAGAGCCAGCACACT > 7:289827/1‑149 CCCTGGAATCGCGGGTCGGTGAACTGCACACCGATGCGCGCCTGGCCTTTCACGCCTGGCGTGACAGCGGCGGTAACCAGATCCTCACCGTTACCCGGTTGATGCGCCTGCGCGACAACACCCCTGTCAAGGTGATGATGTCGCTCAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1638435‑1638285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaccgGGTAACGGTGAGGATCTGGTTACCGCCGCTGTCACGCCAGGCGTGAAAGGCCAGGCGCGCATCGGTGTGCAGTTCACCGACCCGCGATTCCAGGGCCGGGCCGAGGCTGAGCAGGTGGGGGTGGCGGCCGTCGAGAGCCAGCACACT > NC_002947/1638341‑1638487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |