| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1675701 = | 48 (0.970) | 3 (0.060) | 3/242 | NT | 6.6% | coding (868/1305 nt) | hom | homoserine dehydrogenase |
| ? | NC_002947 | 1675742 = | 39 (0.840) | coding (909/1305 nt) | hom | homoserine dehydrogenase | |||||
GCCGACAGCGAGTCTGGCTGGAATGCCAGGTGCGGCACACGGTTCTCCGGGTCGGAGGTCATGGCACGGACCACGTCGACCAGGTCGCCGACCACTGACGAAGCGGTAGGCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1675849‑1675701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagccTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCGCCTAC > NC_002947/1675742‑1675889 GCCGACAGCGAGTCTGGCTGGAATGCCAGGTGCGGCACACGGTTCTCCGGGTCGGAGGTCATGGCACGGACCACGTCGACCAGGTCGCCGACCACTGACGAATCGGTAGGCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGAGCC < 1:69498/149‑1 TCGGAGGTCATGGCACGGACCACGTCGACCAGGTCGCCGACCACTGACGAAGCGGTAGGCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGA > 5:111187/1‑95 TCGGAGGTCATGGCACGGACCACGTCGACCAGGTCGCCGACCACTGACGAAGCGGTAGGCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGA < 6:111187/95‑1 AGGCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGAGCCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGC > 7:278773/1‑143 AGGCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGAGCCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGC < 8:278773/143‑1 GCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGAGCCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCC > 6:219183/1‑149 GGAGCCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCG > 3:3205/1‑149 GGAGCCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCG > 3:7598/1‑149 GAGCCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCGC < 6:116803/149‑1 AGCCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCGCC < 5:219183/149‑1 CCTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCGCCTA < 2:44380/149‑1 CTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCGATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCGCCTAC > 1:228862/1‑149 GCCGACAGCGAGTCTGGCTGGAATGCCAGGTGCGGCACACGGTTCTCCGGGTCGGAGGTCATGGCACGGACCACGTCGACCAGGTCGCCGACCACTGACGAAGCGGTAGGCTCCATACCCGCGCCAGCACCGTAGTACAGGGTGGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1675849‑1675701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggagccTACCGCTTCGTCAGTGGTCGGCGACCTGGTCGACGTGGTCCGTGCCATGACCTCCGACCCGGAGAACCGTGTGCCGCACCTGGCATTCCAGCCAGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGCCTGCGAAAGCGCCTAC > NC_002947/1675742‑1675889 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |