New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1710452 = | 40 (0.810) | 3 (0.060) | 3/246 | NT | 6.9% | coding (1071/2628 nt) | ppc | phosphoenolpyruvate carboxylase |
? | NC_002947 | 1710524 = | 42 (0.890) | coding (1143/2628 nt) | ppc | phosphoenolpyruvate carboxylase |
CCGAAGGTCACCGCACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1710529‑1710452 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCTTCGGCCTGTTCCTGGGCCGCCTGGACGTACGCCAGGACGCTGCCCGCCACCGTGATGCGCTGACCGAGATAACCGATTACCTG > NC_002947/1710524‑1710608 CCGAAGGTCACCGCACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGACCTTCGGCCTGTTCCTGGGCCGCCTGGACGTACGCCAGGACGCTGCCCGCCACCGTGATGCGCTGACC > 5:232788/1‑145 AAGGTCACCGCACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGACCTTCGGCCTGTTCCTGGGCCGCCTGGACGTACGCCAGGACGCTGCCCGCCACCGTGATGCGCTGACCGAGATAA > 8:134867/1‑149 ACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGACCTTCGGCCTGTTCCTGGGCCGCCTGGACGTACGCCAGGACGCTGCCCGCCACCGTGATGCGCTGACCGAGATAACCGATTACCTG < 7:134867/149‑1 CCGAAGGTCACCGCACGACGCAAGCAGTCGAGCAGCGGCCCCTCGGCGATCACGCCCATACCGCATTCGTGCAGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1710529‑1710452 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCTTCGGCCTGTTCCTGGGCCGCCTGGACGTACGCCAGGACGCTGCCCGCCACCGTGATGCGCTGACCGAGATAACCGATTACCTG > NC_002947/1710524‑1710608 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |