| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1855558 | 37 (0.750) | 4 (0.090) | 4/240 | NT | 9.8% | coding (570/1341 nt) | PP_1659 | hypothetical protein |
| ? | NC_002947 | = 1855620 | 39 (0.840) | coding (632/1341 nt) | PP_1659 | hypothetical protein | |||||
TTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1855406‑1855558‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgacTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACC < NC_002947/1855620‑1855474 TTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGC > 3:274108/1‑149 ATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGA < 8:29976/149‑1 TGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACTTGACCATGATCGCGCCGACCTGC > 6:77466/1‑149 GTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTC < 5:77466/149‑1 GCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACTTGACCATGATCTCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTG < 4:34999/148‑1 GCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGACTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTG > 3:34999/1‑148 AGGCCGACTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGG < 7:293072/98‑1 AGGCCGACTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGG > 8:293072/1‑98 AGGCCGACTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTAGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGGCTAGGAACATCGGCTGG > 1:109297/1‑149 GCCGACTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTT < 6:199389/149‑1 ACTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACC < 3:65578/149‑1 TTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCAAAGCGGCACTTACACGCGCAACGCGATCATGGTCAACCAGCCGATGTTCGATGACATCGTCAACAATGGCCTGTACAGCAAGGAGGGCCAGCAAGCGTTCCTGAGCAAGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1855406‑1855558‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgacTTGACCATGATCGCGCCGACCTGCTGGGTCTTTTGCGAACCGCAGGCGAAAGCGATGCGGTTGTCGGCCTTGCTCAGGAACGCTTGCTGGCCCTCCTTGCTGTACAGGCCATTGTTGACGATGTCATCGAACATCGGCTGGTTGACC < NC_002947/1855620‑1855474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |