New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2354551 | 55 (1.110) | 6 (0.130) | 4/240 | NT | 11.0% | intergenic (‑20/+38) | PP_2068/PP_2069 | multidrug MFS transporter membrane fusion protein/multidrug MFS transporter outer membrane protein |
? | NC_002947 | = 4856112 | 46 (0.990) | intergenic (+84/+112) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein |
CATGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2354397‑2354551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTTGCGCTGG < NC_002947/4856112‑4856016 CATGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTT > 6:182437/1‑149 ATGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTC > 6:305073/1‑149 GGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGCTATATTCTTCGCGGGCATGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTT > 3:90131/1‑149 TTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGCCCGCTCCCCCAGGGATCGCGCCAGCTTTTAGAAATTGAGCAA < 2:242216/103‑1 TTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGCCCGCTCCCCCAGGGATCGCGCCAGCTTTTAGAAATTGAGCAA < 7:213372/103‑1 TTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGCCCGCTCCCCCAGGGATCGCGCCAGCTTTTAGAAATTGAGCAA > 8:213372/1‑103 TTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCAGGCAAGCCCGCTCCCCCAGGGATCGCGCCAGCTTTTAGAAATTGAGCAA > 1:242216/1‑103 CCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGCTATATTCTTCGCGGGCATGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTTGCGCTGG < 4:90131/149‑1 CATGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2354397‑2354551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTTGCGCTGG < NC_002947/4856112‑4856016 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |