New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2362107 | 61 (1.240) | 4 (0.090) | 4/242 | NT | 6.1% | coding (1770/2724 nt) | PP_2076 | hypothetical protein |
? | NC_002947 | = 2362130 | 65 (1.390) | coding (1747/2724 nt) | PP_2076 | hypothetical protein |
CCTTGATACCTGGCCTGCGCTGCGTTGTGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGTCCATGCTGTTGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2361957‑2362107 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttggggCGGCAAGTGCTGCGCACCGCGACCCCCAACAGCATGGACCGCGCACTGCACCAGGGTTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCC < NC_002947/2362130‑2361985 CCTTGATACCTGGCCTGCGCTGCGTTGTGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGTCCATGCTGTTGG < 1:261343/149‑1 ATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGTCCATGCTGTTGGGGCGGCAAGTGCTGCGCACCGCGACCCCCAACA < 8:93780/148‑1 TGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGCCCATGCTGTTGGGGCGGCAAGTGCTGCGCACCGCGACCCCCAACAGC < 1:70459/149‑1 TCAGCCGCAAACCCTGGTGCAGTGCGCGGTCCATGCTGTTGGGGCGGCAAGTGCTGCGCACCGCGACCCCCAA < 7:77646/73‑1 TCAGCCGCAAACCCTGGTGCAGTGCGCGGTCCATGCTGTTGGGGCGGCAAGTGCTGCGCACCGCGACCCCCAA > 8:77646/1‑73 GTTGGGGCGGCAAGTGCTGCGCACCGCGACCCCCAACAGCATGGACCGCGCACTGCACCAGGGTTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATC > 2:1069/1‑148 GGGCGGCAAGTGCTGCGCACCGCGACCCCCAACAGCATGGACCGCGCACTGCACCAGGGTTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCGATCAACCC < 5:36149/149‑1 CCTTGATACCTGGCCTGCGCTGCGTTGTGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAGGTCAGCCGCAAACCCTGGTGCAGTGCGCGGTCCATGCTGTTGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2361957‑2362107 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttggggCGGCAAGTGCTGCGCACCGCGACCCCCAACAGCATGGACCGCGCACTGCACCAGGGTTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCC < NC_002947/2362130‑2361985 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |