New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2562510	40 (0.810)	3 (0.070)	3/238	NT	7.5%	coding (248/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	= 2562545	37 (0.810)					coding (283/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase

GAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2562359‑2562510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctgctCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGGCCGCCG  <  NC_002947/2562545‑2562399                                                                                                                                                                                                                                                                                                             GAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCT                                                                                                                                                        <  8:229352/149‑1                                                CATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGG                                                                                                         <  7:170652/149‑1                                                   GTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGT                                                                                                        >  3:289146/1‑147                                                   GTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGT                                                                                                        <  4:289146/147‑1                                                                                                                                                        TCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAACAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGGCCGCCG  >  5:279483/1‑148                                                                                                                                                                                                                                                                                                             GAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2562359‑2562510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctgctCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGGCCGCCG  <  NC_002947/2562545‑2562399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.