New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2593638	30 (0.610)	3 (0.060)	3/240	NT	9.7%	coding (136/411 nt)	PP_5509	hypothetical protein
	?	NC_002947	= 2593675	28 (0.610)					coding (173/411 nt)	PP_5509	hypothetical protein

AACTCCTGGACTGAACCATGCGCAAGTTGATCTTCGCGGCCCTGGCCGTCCTTTCCCTGGCCGCCTGTGAGCGCCACTCCTGCTACAGCCCAGCCGTTGTGCAGGCCCCAGTAGTCGAAGCTCCGGCCCCAGTGGTTGCCGCTCCAGTTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2593486‑2593638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttgtccTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTGGAGCGGCAACCACTGGGGCCGGAGCTTCGACTACTGGGGCCTGCACAACGGCTGGGCTGTAGCAGGAGTGGCGCTCACAGGCGGCCAGGGAAAGG  <  NC_002947/2593675‑2593535                                                                                                                                                                                                                                                                                                        AACTCCTGGACTGAACCATGCGCAAGTTGATCTTCGCGGCCCTGGCCGTCCTTTCCCTGGCCGCCTGTGAGCGCCACTCCTGCTACAGCCCAGCCGTTGTGCAGGCCCCAGTAGTCGAAGCTCCGGCCCCAGTGGTTGCCGCTCCAGTT                                                                                                                                                   <  3:120404/149‑1                                            GGCCGTCCTTTCCCTGGCCGCCTGTGAGCGCCACTCCTGCTACAGCCCAGCCGTTGTGCAGGCCCCAGTAGTCGAAGCTCCGGCCCCAGTGGTTGCCGCTCCAGTTGTCCTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTG                                                                                                         >  2:24457/1‑148                                                   CTTTCCCTGGCCGCCTGTGAGCGCCACTCCTGCTACAGCCCAGCCGTTGTGCAGGCCCCAGTAGTCGAAGCTCCGGCCCCAGTGGTTGCCGCTCCAGTTGTCCTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTG                                                                                                 <  4:93638/149‑1                                                       CCCTGGCCGCCTGTGAGCGCCACTCCTGCTACAGCCCAGCCGTTGTGCAGGCCCCAGTAGTCGAAGCTCCGGCCCCAGTGGTTGCCGCTCCAGTTGTCCTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTGGAG                                                                                              <  1:24457/148‑1                                                                                                                                                  AGTTGTCCTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTGGAGCGGCAACCACTGGGGCCGGAGCTTCGACTACTGGGGCCTGCACAACGGCTGGGCTGTAGCAGGAGTGGCGCTCACAGGCGGCCAGGGAAAGG  <  1:177494/149‑1                                                                                                                                                  AGTTGTCCTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTGGAGCGGCAACCACTGGGGCCGGAGCTTAGACTACTGGGGCCTGCACAACGGCTGGGCTGTAGCAGGAGTGGCGCTCACAGTCGGCCAGGGAAAG   >  7:147592/1‑148                                                                                                                                                    TTGTCCTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTGGAGCGGCAACCACTGGGGCCGGAGCTTCGACTACTGGGGCCTGCACAACGGCTGGG                                         >  7:129323/1‑108                                                                                                                                                    TTGTCCTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTGGAGCGGCAACCACTGGGGCCGGAGCTTCGACTACTGGGGCCTGCACAACGGCTGGG                                         <  8:129323/108‑1                                                                                                                                                                                                                                                                                                        AACTCCTGGACTGAACCATGCGCAAGTTGATCTTCGCGGCCCTGGCCGTCCTTTCCCTGGCCGCCTGTGAGCGCCACTCCTGCTACAGCCCAGCCGTTGTGCAGGCCCCAGTAGTCGAAGCTCCGGCCCCAGTGGTTGCCGCTCCAGTTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2593486‑2593638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttgtccTGGACCACTGGCGCCGCTTGCACGATCGGGGCAGCCTGGACAACTGGAGCGGCAACCACTGGGGCCGGAGCTTCGACTACTGGGGCCTGCACAACGGCTGGGCTGTAGCAGGAGTGGCGCTCACAGGCGGCCAGGGAAAGG  <  NC_002947/2593675‑2593535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.