New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2704862 =	37 (0.750)	4 (0.080)	4/246	NT	11.3%	coding (2019/4188 nt)	PP_2369	leucine‑rich repeat‑containing protein
	?	NC_002947	2704882 =	27 (0.570)					coding (2039/4188 nt)	PP_2369	leucine‑rich repeat‑containing protein

CCAGCGCGAGCTTACCGGTATCGTCATTTTCTGCGGCGGCCTGGCGCAACCCTGCGCAGGCACGGTCTATCCGGCTGTCGCGTATTGCCCAGCGGGCACGCTCCGCCAAGGCCAGGGGTACCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2704989‑2704862 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctTGGCGGAGCGTGCCCGCTGGGCAATACGCGACAGCCGGATAGACCGTGCCTGCGCAGGGTTGCGCCAGGCCGCCGCAGAAAATGACGATACCGGTAAGCTCGCGCTGGGCCTGATCGATGCCATCGCCCCTTGGTCGGCTGGGGT  >  NC_002947/2704882‑2705026                                                                                                                                                                                                                                                                                   CCAGCGCGAGCTTACCGGTATCGTCATTTTCTGCGGCGGCCTGGCGCAACCCTGCGCAGGCACGGTCTATCCGGCTGTCGCGTATTGCCCAGCGGGCACGCTCCGCCAAGGCCGGGTACCCCTGGCCTTGGCGGAGCGTGCCCGCTGGG                                                                                                                              <  2:258333/149‑1                                                                                                         GCCAAGGCCAGGGGTACCCGGCCTTGGCGGAGCGTGCCCGCTGGGCAATACGCGACAGCCGGATAGACCGTGCCTGCGCAGGGTTGCGCCAG                                                                               <  7:121778/92‑1                                                                                                         GCCAAGGCCAGGGGTACCCGGCCTTGGCGGAGCGTGCCCGCTGGGCAATACGCGACAGCCGGATAGACCGTGCCTGCGCAGGGTTGCGCCAG                                                                               >  8:121778/1‑92                                                                                                          CCAAGGCCAGGGGTACCCGGCCTTGGCGGAGCGTGCCCGCTGGGCAATACGCGACAGCCGGATAGACCGTGCCTGCGCAGGGTTGCGCCAGGCCGCCGCAGAAAATGACGATACCGGTAAGCTCGCGCTGGGCCTGATCGATGCCATCG                     <  1:258333/149‑1                                                                                                                             GCCTTGGCGGAGCGTGCCCGCTGGGCAATACGCGACAGCCGGATAGACCGTGCCTGCGCAGGGTTGCGCCAGGCCGCCGCAGAAAATGACGATACCGGTAAGCTCGCGCTGGGCCTGATCGATGCCATCGCCCCTTGGTCGGCTGGGGT  <  1:11709/149‑1                                                                                                                             GCCTTGGCGGAGCGTGCCCGCTGGGCAATACGCGACAGCCGGATAGACCGTGCCTGCGCAGGGTTGCGCCAGGCCGCCGCAGAAAATGACGATACCGGTAAGCTCGCGCTGGGCCTGATCGATGCCATCGCCCCTTGGTCGGCTGGG    <  7:36827/147‑1                                                                                                                                                                                                                                                                                   CCAGCGCGAGCTTACCGGTATCGTCATTTTCTGCGGCGGCCTGGCGCAACCCTGCGCAGGCACGGTCTATCCGGCTGTCGCGTATTGCCCAGCGGGCACGCTCCGCCAAGGCCAGGGGTACCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2704989‑2704862 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctTGGCGGAGCGTGCCCGCTGGGCAATACGCGACAGCCGGATAGACCGTGCCTGCGCAGGGTTGCGCCAGGCCGCCGCAGAAAATGACGATACCGGTAAGCTCGCGCTGGGCCTGATCGATGCCATCGCCCCTTGGTCGGCTGGGGT  >  NC_002947/2704882‑2705026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.