New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2705526	42 (0.850)	4 (0.090)	3/244	NT	10.5%	coding (2683/4188 nt)	PP_2369	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2705600	28 (0.600)					coding (2757/4188 nt)	PP_2369	leucine‑rich repeat‑containing protein

GGCGGGGAGTGGACCCCTGGAACCATGTGAGCCAACTGCTACAGGCCAAGGTCAGCCTCAAGCAGGCATTGCAAGCCTGGCGAAATGACGCAGGACTGAACATTGT‑TCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2705377‑2705526 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaaCTCACCCACCCGCTCACCCACGAGGGTCAGGTGGTAGTCACCCGCCACCTCCCCTGGGGTAAAGCGCTGCCAGCTTGCCGTAATGCGCCTGGCAACCTTGAAACGACGCAGGCGGCGAACAATGTTCAGTCCTGCGTCATTTCGC  <  NC_002947/2705600‑2705456                                                                                                                                                                                                                                                                                                          GGCGGGGAGTGGACCCCTGGAACCATGTGAGCCAACTGCTACAGGCCAAGGTCAGCCTCAAGCAGGCATTGCAAGCCTGGCGAAATGACGCAGGACTGAACATTGT‑TCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGC                                                                                                                                                     <  2:18686/148‑1  GCGGGGAGTGGACCCCTGGAACCATGTGAGCCAACTGCTACAGGCCAAGGTCAGCCTCAAGCAGGCATTGCAAGCCTGGCGAAATGACGCATGACTGAACATTGT‑TCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGCAA                                                                                                                                                   <  2:234967/149‑1                                                                             CTGGCGAAATGACGCAGGACTGAACATTGTGTCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGCAACTCACCCACCCGCTCACCCACGAGGGTCAGGTGGTAGTCACCCGCCACCTCCCCTGGGGTAAAGCGCTGCCAGC                                                                         >  1:28368/1‑149                                                                                        ACGCAGGACTGAACATTGT‑TCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGCAACTCACCCACCCGCTCACCCACGAGGGTCAGGTGGTAGTCACCCGCCACCTCCCCTGGGGTAAAGCGCTGCCAGCTTGCCGTAATG                                                              <  2:28368/148‑1                                                                                                 TGAACATTGT‑TCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGCAACTCACCCACCCGCTCACCCACGAGGGTCAGGTGGTAGTCACCCGCCACCTCCCCTGGGGTAAAGCGCTGCCAGCTTGCCGTAATG                                                              >  1:220683/1‑139                                                                                                 TGAACATTGT‑TCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGCAACTCACCCACCCGCTCACCCACGAGGGTCAGGTGGTAGTCACCCGCCACCTCCCCTGGGGTAAAGCGCTGCCAGCTTGCCGTAATG                                                              <  2:220683/139‑1                                                                                                                                                    GCAACTCACCCACCCGCTCACCCACGAGGGTCAGGTGGTAGTCACCCGCCACCTCCCCTGGGGTAAAGCGCTGCCAGCTTGCCGTAATGCGCCTGGCAACCTTGAAACGACGCAGGCGGCGAACAATGTTCAGTCCTGCGTCATTTCGC  <  7:257213/149‑1                                                                                                                                                                                                                                                                                                          GGCGGGGAGTGGACCCCTGGAACCATGTGAGCCAACTGCTACAGGCCAAGGTCAGCCTCAAGCAGGCATTGCAAGCCTGGCGAAATGACGCAGGACTGAACATTGT‑TCGCCGCCTGCGTCGTTTCAAGGTTGCCAGGCGCATTACGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2705377‑2705526 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaaCTCACCCACCCGCTCACCCACGAGGGTCAGGTGGTAGTCACCCGCCACCTCCCCTGGGGTAAAGCGCTGCCAGCTTGCCGTAATGCGCCTGGCAACCTTGAAACGACGCAGGCGGCGAACAATGTTCAGTCCTGCGTCATTTCGC  <  NC_002947/2705600‑2705456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.