| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2757933 = | 36 (0.730) | 3 (0.060) | 3/244 | NT | 7.1% | coding (259/1338 nt) | PP_2411 | MFS transporter |
| ? | NC_002947 | 2757998 = | 44 (0.940) | coding (194/1338 nt) | PP_2411 | MFS transporter | |||||
TCGCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2758085‑2757933‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCGGCAA > NC_002947/2757998‑2758145 TCGCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAG > 1:205143/1‑149TCGCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAG > 8:293774/1‑149 CTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGC > 6:257825/1‑149 TTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCG > 4:118191/1‑149 CCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGC < 5:257825/149‑1 AGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTCAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTCGCGCTCAGCGTGGCGACAAAGCCGTACACGGCGAACTCGACCAATTCGACGAAAATCCCCAAGGCCGAAGC > 8:231928/1‑149 GCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCG > 6:27678/1‑149 CGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCGG < 7:20112/149‑1 AAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCGGCAA < 5:7/149‑1 TCGCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2758085‑2757933‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCGGCAA > NC_002947/2757998‑2758145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |