New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2757933 =	36 (0.730)	3 (0.060)	3/244	NT	7.1%	coding (259/1338 nt)	PP_2411	MFS transporter
	?	NC_002947	2757998 =	44 (0.940)					coding (194/1338 nt)	PP_2411	MFS transporter

CCGGCATATTCGCCGCCGGCAGAAAAACCCTGCAGGCAGCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGG  >  NC_002947/2757785‑2758070                                                                                                                                                     |                                                                                                                                          ttgccgcttcggccatcggcaatttcgtcgaatggttcgacttcgccgtgtacggctttctcgccacgctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttt                                                                                                                                           <  5:7‑M1/1‑1 (MQ=255)   ggCATATTCGCCGCCGGCAGAAAAACCCTGCAGGCAGCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATgc                                                                                                                                         <  8:128583/149‑1 (MQ=255)    ccgcttcggccatcggcaatttcgtcgaatggttcgacttcgccgtgtacggctttctcgccacgctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttTgcg                                                                                                                                        <  7:20112‑M1/4‑1 (MQ=255)     cgcttcggccatcggcaatttcgtcgaatggttcgacttcgccgtgtacggctttctcgccacgctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttTgcgc                                                                                                                                       >  6:27678‑M1/145‑149 (MQ=255)     cATATTCGCCGCCGGCAGAAAAACCCTGCAGGCAGCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATgcgc                                                                                                                                       <  5:77459/149‑1 (MQ=255)      gcttcggccttggggattttcgtcgaattggtcgagttcgccgtgtacggctttgtcgccacgctgagcgcgagccagttcttcgccagcgaagacgccagcgtggccttgctgaaaaccttcgcggtgttcgccgtggccttTGCGCt                                                                                                                                      >  8:231928‑M1/144‑149 (MQ=255)       tatTCGCCGCCGGCAGAAAAACCCTGCAGGCAGCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCtt                                                                                                                                     <  2:41707/149‑1 (MQ=255)             ccgccgGCAGAAAAACCCTGCAGGCAGCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTcc                                                                                                                               >  7:175409/1‑149 (MQ=255)                              cTGCAGGCAGCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGGTGCGCTTGCGTCCCAGGCGGTCGCCCAAgg                                                                                                              >  6:204930/1‑149 (MQ=255)                                    gcagCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGa                                                                                                        <  8:231455/149‑1 (MQ=255)                                    gcagCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGAGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGCCAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCg                                                                                                         >  2:81339/1‑148 (MQ=255)                                          ggCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGa                                                                                                  <  5:161849/149‑1 (MQ=255)                                            ccAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATg                                                                                                >  7:293774/1‑149 (MQ=255)                                                   cagcagCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGccc                                                                                          >  7:123729/1‑148 (MQ=255)                                                     gcagcGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCaaa                                                                                       <  1:96446/149‑1 (MQ=255)                                                     gcagcGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCa                                                                                         >  2:96446/1‑147 (MQ=255)                                                      cagcGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAg                                                                                      >  3:242673/1‑149 (MQ=255)                                                       gctttctcgccacgctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttTGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAgg                                                                                     <  5:257825‑M1/55‑1 (MQ=255)                                                                   cgctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttTGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCaaa                                                                         >  4:118191‑M1/83‑149 (MQ=255)                                                                    gctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttTGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAg                                                                        >  6:257825‑M1/82‑149 (MQ=255)                                                                      aGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGc                                                                      <  8:175409/149‑1 (MQ=255)                                                                          cGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACg                                                                  <  2:207584/149‑1 (MQ=255)                                                                                tGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATgcgc                                                                                                                                       <  5:228074/74‑1 (MQ=255)                                                                                tGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATgcgc                                                                                                                                       >  6:228074/1‑74 (MQ=255)                                                                                  gCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAacac                                                          >  2:238113/1‑149 (MQ=255)                                                                                       ggTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCTAAAGGGCGCAGCGCAAAGGCCACGGCGAACACcgcg                                                      >  6:256938/1‑148 (MQ=255)                                                                                            gcagcaGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGtt                                                <  8:123729/149‑1 (MQ=255)                                                                                                   gCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGc                                          >  1:106505/1‑148 (MQ=255)                                                                                                      gATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAgg                                      >  1:314361/1‑149 (MQ=255)                                                                                                        tCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGcc                                    <  1:238113/149‑1 (MQ=255)                                                                                                           aCGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACg                                 >  1:106552/1‑149 (MQ=255)                                                                                                            cGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGc                                >  4:267009/1‑149 (MQ=255)                                                                                                             gtggtgGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCt                               <  3:285580/149‑1 (MQ=255)                                                                                                              tggtggAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTg                              <  3:267009/149‑1 (MQ=255)                                                                                                                gtggAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGc                            <  2:314361/149‑1 (MQ=255)                                                                                                                   gAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTc                         >  2:205143/1‑149 (MQ=255)                                                                                                                   gAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTc                         <  3:102542/149‑1 (MQ=255)                                                                                                                     gCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCtt                       >  6:66139/1‑149 (MQ=255)                                                                                                                            aTCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGCCGGTCGCCAAAGGCGCCGAAGACGATGCCGCCCAAACGGCGCACCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTCAGCAAGGCCACGCACGCGTATTCGCAGGc                >  3:306063/1‑149 (MQ=255)                                                                                                                               aGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCgaa             <  1:81339/149‑1 (MQ=255)                                                                                                                                 cAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCaaa                                                                         <  8:231900/87‑1 (MQ=255)                                                                                                                                    gATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCCAGCgaagacgc        <  4:242673/149‑4 (MQ=255)                                                                                                                                    gATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGGTTTGAGCAAGGCCACGCGGGCGTCTTCGCTGGCGAAGAAct        >  5:251026/1‑149 (MQ=255)                                                                                                                                      tGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCTAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAActgg      <  5:256938/149‑1 (MQ=255)                                                                                                                                       ggTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAgg                                      >  6:149060/1‑116 (MQ=255)                                                                                                                                       ggTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAgg                                      <  5:149060/116‑1 (MQ=255)                                                                                                                                           aGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAActggctgg  <  2:106505/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                          CCGGCATATTCGCCGCCGGCAGAAAAACCCTGCAGGCAGCGGGCCAGGGTCAGCAGCGCCGGGGCTGCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGG  >  NC_002947/2757785‑2758070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.