| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2757933 = | 36 (0.730) | 3 (0.060) | 3/244 | NT | 7.1% | coding (259/1338 nt) | PP_2411 | MFS transporter |
| ? | NC_002947 | 2757998 = | 44 (0.940) | coding (194/1338 nt) | PP_2411 | MFS transporter | |||||
GCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCGGCAA > NC_002947/2757851‑2758145 | cgctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttTGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCaaa > 4:118191‑M1/83‑149 (MQ=255) gctgatcgccagccagttcttcgccagcgaagacgccagcgtggccttgctcaaaaccttcgcggtgttcgccgtggccttTGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAg > 6:257825‑M1/82‑149 (MQ=255) aGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGc < 8:175409/149‑1 (MQ=255) cGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACg < 2:207584/149‑1 (MQ=255) gCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAacac > 2:238113/1‑149 (MQ=255) ggTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCTAAAGGGCGCAGCGCAAAGGCCACGGCGAACACcgcg > 6:256938/1‑148 (MQ=255) gcagcaGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGtt < 8:123729/149‑1 (MQ=255) gCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGc > 1:106505/1‑148 (MQ=255) gATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAgg > 1:314361/1‑149 (MQ=255) tCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGcc < 1:238113/149‑1 (MQ=255) aCGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACg > 1:106552/1‑149 (MQ=255) cGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGc > 4:267009/1‑149 (MQ=255) gtggtgGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCt < 3:285580/149‑1 (MQ=255) tggtggAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTg < 3:267009/149‑1 (MQ=255) gtggAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGc < 2:314361/149‑1 (MQ=255) gAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTc > 2:205143/1‑149 (MQ=255) gAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTc < 3:102542/149‑1 (MQ=255) gCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCtt > 6:66139/1‑149 (MQ=255) aTCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGCCGGTCGCCAAAGGCGCCGAAGACGATGCCGCCCAAACGGCGCACCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTCAGCAAGGCCACGCACGCGTATTCGCAGGc > 3:306063/1‑149 (MQ=255) aGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCgaa < 1:81339/149‑1 (MQ=255) cAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCaaa < 8:231900/87‑1 (MQ=255) gATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCCAGCgaagacgc < 4:242673/149‑4 (MQ=255) gATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGGTTTGAGCAAGGCCACGCGGGCGTCTTCGCTGGCGAAGAAct > 5:251026/1‑149 (MQ=255) tGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCTAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAActgg < 5:256938/149‑1 (MQ=255) ggTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAgg < 5:149060/116‑1 (MQ=255) ggTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAgg > 6:149060/1‑116 (MQ=255) aGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAActggctgg < 2:106505/148‑1 (MQ=255) ctttgcgctgcgccctttgggcggcatcgtcttcggcgccttgggcgaccgcctgggacgcaagcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGc > 6:257825‑M2/69‑149 (MQ=255) tttgcgctgcgccctttgggcggcatcgtcttcggcgccttgggcgaccgcctgggacgcaagcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCg > 4:118191‑M2/68‑149 (MQ=255) CTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCga > 8:293774‑M1/1‑149 (MQ=255) CTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCga > 1:205143‑M1/1‑149 (MQ=255) tGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGGGATCAGCGTGGCgag > 5:262288/1‑148 (MQ=255) gCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCgaga > 6:36129/1‑148 (MQ=255) cctttgggcggcatcgtcttcggcgccttgggcgaccgcctgggacgcaagcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGc < 5:257825‑M2/94‑1 (MQ=255) ccAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCg > 5:64068/1‑149 (MQ=255) ccAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCg < 5:204930/149‑1 (MQ=255) cAGGCGGTCGCCCAAGGCGCAGAAGACGATGCCGACCAAAGGGAGCAGGGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGACACGCTGGCGTCTTAGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGt < 4:306063/149‑1 (MQ=255) ggTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAActggctgg > 8:13987/1‑120 (MQ=255) ggTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAActggctgg < 7:13987/120‑1 (MQ=255) ggTCGCCCAAGGCGCAGAAGACGATGCCGCCCACAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACg < 4:1450/149‑1 (MQ=255) tCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCga < 1:103449/133‑1 (MQ=255) tCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCga > 2:103449/1‑133 (MQ=255) cccAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCg > 5:301303/1‑147 (MQ=255) ccAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAg > 6:7/1‑149 (MQ=255) aGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTc > 5:313620/1‑148 (MQ=255) gcCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAAc > 8:20112/1‑148 (MQ=255) gAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGaaa < 1:144406/123‑1 (MQ=255) gAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGaaa > 2:144406/1‑123 (MQ=255) aaGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCTGTACACGGCGAAGTCGAACCATTc > 7:247014/1‑149 (MQ=255) gACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTcga < 2:106552/149‑1 (MQ=255) aCGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTcgac < 6:313620/149‑1 (MQ=255) gccCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGATGTCGAACCATTCGACGAAATTGc > 3:166622/1‑149 (MQ=255) gccCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGc < 5:36129/149‑1 (MQ=255) gcagcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCg > 6:265362/1‑147 (MQ=255) agcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTCAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTCGCGCTCAGCGTGGCGACAAAGCCGTACACGGCGAACTCGACCAATTCGACGAAAATCCCCAAGGCCGAAGc > 8:231928‑M2/7‑149 (MQ=255) gcgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCg > 6:27678‑M2/6‑149 (MQ=255) cgcaAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCgg < 7:20112‑M2/145‑1 (MQ=255) aAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCGGCaa < 5:7‑M2/148‑1 (MQ=255) aaGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTcgac > 7:223458/1‑122 (MQ=255) aaGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTcgac < 8:223458/122‑1 (MQ=255) | GCCAGGCCGATACTGGCGTAGGTCGGCAGCAGGCCGATCAACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGGCGTCTTCGCTGGCGAAGAACTGGCTGGCGATCAGCGTGGCGAGAAAGCCGTACACGGCGAAGTCGAACCATTCGACGAAATTGCCGATGGCCGAAGCGGCAA > NC_002947/2757851‑2758145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |