New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2970432 =	45 (0.910)	4 (0.090)	4/242	NT	9.1%	coding (771/2391 nt)	PP_2599	chemotaxis sensory transducer family protein
	?	NC_002947	2970464 =	37 (0.790)					coding (803/2391 nt)	PP_2599	chemotaxis sensory transducer family protein

TGTTCACCGCGGCACGAGGCGGCCAGGCGCAGCAAAGCCTGTTCAGCGTCGTACAGGTAAACCCCGCCGGCGTCGCCTCCGGCAGCTTCTACCAGATGGCTCAGCACGCCATCGAGCATGCGCTCCAGGTCTCGCTCGCGGCTGAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2970581‑2970432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcaTGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCCGCCTCGTGCCGCGGTGAACACTACCCAAGCGAGCTGGCAGTGGATGAAAG  >  NC_002947/2970464‑2970611                                                                                                                                                                                                                                                                                                            TGTTCACCGCGGCACGAGGCGGCCAGGCGCAGCAAAGCCTGTTCAGCGTCGTACAGGTAAACCCCGCCGGCGTCGCCTCCGGCAGCTTCTACCAGATGGCTCAGCACGCCATCGAGCATGCGCTCCAGGTCTCGCTCGCGGCTGAGCG                                                                                                                                                        >  5:191537/1‑148                                                                                                                     CATGCGCTCCAGGTCTCGCTCGCGGCTGAGCGCATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCC                                                    >  5:251885/1‑132                                                                                                                     CATGCGCTCCAGGTCTCGCTCGCGGCTGAGCGCATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCC                                                    <  6:251885/132‑1                                                                                                                       TGCGCTCCAGGTCTCGCTCGCGGCTGAGCGCATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGC                                                          <  3:81561/124‑1                                                                                                                       TGCGCTCCAGGTCTCGCTCGCGGCTGAGCGCATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGC                                                          >  4:81561/1‑124                                                                                                                                                GAGCGCATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCCGCCTCGTGCCGCGGT                                     <  3:199392/120‑1                                                                                                                                                GAGCGCATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCCGCCTCGTGCCGCGGT                                     >  4:199392/1‑120                                                                                                                                                     CATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCCGCCTCGTGCCGCGGTGAACACTACCCAAGCGAGCTGGCAGTGGATGA     >  1:211091/1‑147                                                                                                                                                     CATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCCGCCTCGTGCCGCGGTGAACACTACCCAAGCGAGCTGGCAGTGGATGA     >  2:149483/1‑147                                                                                                                                                      ATGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCCGCCTCGTGCCGCGGTGAACACTACCCAAGCGAGCTGGCAGTGGATGAAAG  >  5:317511/1‑149                                                                                                                                                                                                                                                                                                            TGTTCACCGCGGCACGAGGCGGCCAGGCGCAGCAAAGCCTGTTCAGCGTCGTACAGGTAAACCCCGCCGGCGTCGCCTCCGGCAGCTTCTACCAGATGGCTCAGCACGCCATCGAGCATGCGCTCCAGGTCTCGCTCGCGGCTGAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2970581‑2970432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcaTGCTCGATGGCGTGCTGAGCCATCTGGTAGAAGCTGCCGGAGGCGACGCCGGCGGGGTTTACCTGTACGACGCTGAACAGGCTTTGCTGCGCCTGGCCGCCTCGTGCCGCGGTGAACACTACCCAAGCGAGCTGGCAGTGGATGAAAG  >  NC_002947/2970464‑2970611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.