| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3082878 = | 37 (0.750) | 4 (0.090) | 3/240 | NT | 10.7% | coding (1190/1551 nt) | PP_2692 | BCCT family transporter |
| ? | NC_002947 | 3082933 = | 32 (0.690) | coding (1135/1551 nt) | PP_2692 | BCCT family transporter | |||||
TATGTCGCGCGGATCTCGCGGGGCCGCACCATCCGCGAGATCATCATGACGCTGTCGATCATCGCACCGCTGGTGACCATGTTCTGGTTCACTGTGGTGGGCGGTACCGGGATCGGCCTGGAGCTGCAAACGCCAGGCAGCGTCACCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3083029‑3082878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcccaCCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGCGACATACAGGGCCACCATGGGCGCATAGCCGATGAACCAGCCCCAATAGAACA > NC_002947/3082933‑3083076 TATGTCGCGCGGATCTCGCGGGGCCGCACCATCCGCGAGATCATCATGACGCTGTCGATCATCGCACCGCTGGTGACCATGTTCTGGTTCACTGTGGTGGGCGGTACCGGGATCGGCCTGGAGCTGCAAACGCCAGGCAGCGTCACCG < 5:53442/148‑1 TGTGGTGGGCGGTACAGGGATCGGCCTGGAGCTGCAAACGCCAGGCAGCGTCACAGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGC > 6:305802/1‑149 TGGGCGGTACCGGGATCGGCCTGGAGCTGCAAACGCCAGGCAGCGTCACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGCGA > 3:215138/1‑148 TGGGCGGTACCGGGATCGGCCTGGAGCTGCAAACGCCAGGCAGCGTCACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGT > 3:199595/1‑104 TGGGCGGTACCGGGATCGGCCTGGAGCTGCAAACGCCAGGCAGCGTCACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGT < 4:199595/104‑1 CCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGCGACATACAGGGCCACCATGGGCGCATAGCCGATGAACCAGCCCCAATAGAA < 4:215138/149‑1 CGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGCGACATACAGGGCCACCATGGTCGCATAGCCGATGAACCAGCCCCAATAGAAC < 5:305802/149‑1 GCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGCGACATACAGGGCCACCATGGGCGCATAGCCGATGAACCAGCCCCAATAGAACA < 4:18505/149‑1 GCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGCGACATACAGGGCCACCATGGGCGCATAGCCGATGAACCAGCCCCAATAGAACA > 6:290059/1‑149 TATGTCGCGCGGATCTCGCGGGGCCGCACCATCCGCGAGATCATCATGACGCTGTCGATCATCGCACCGCTGGTGACCATGTTCTGGTTCACTGTGGTGGGCGGTACCGGGATCGGCCTGGAGCTGCAAACGCCAGGCAGCGTCACCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3083029‑3082878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcccaCCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGCGACATACAGGGCCACCATGGGCGCATAGCCGATGAACCAGCCCCAATAGAACA > NC_002947/3082933‑3083076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |