New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3082878 =	37 (0.750)	4 (0.090)	3/240	NT	10.7%	coding (1190/1551 nt)	PP_2692	BCCT family transporter
	?	NC_002947	3082933 =	32 (0.690)					coding (1135/1551 nt)	PP_2692	BCCT family transporter

GACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGC  >  NC_002947/3082731‑3083023                                                                                                                                                    |                                                                                                                                                  gACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCAt                                                                                                                                                   <  7:268878/148‑1 (MQ=255)    tgttctattggggctggttcatcggctatgcgcccatggtggccctgtatgtcgcgcggatctcgcggggccgcaccatccgcgagatcatcatgacgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGc                                                                                                                                               >  6:290059‑M1/145‑149 (MQ=255)    tgttctattggggctggttcatcggctatgcgcccatggtggccctgtatgtcgcgcggatctcgcggggccgcaccatccgcgagatcatcatgacgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGc                                                                                                                                               <  4:18505‑M1/5‑1 (MQ=255)     gttctattggggctggttcatcggctatgcgaccatggtggccctgtatgtcgcgcggatctcgcggggccgcaccatccgcgagatcatcatgacgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGCg                                                                                                                                              <  5:305802‑M1/6‑1 (MQ=255)      ttctattggggctggttcatcggctatgcgcccatggtggccctgtatgtcgcgcggatctcgcggggccgcaccatccgcgagatcatcatgacgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGCgg                                                                                                                                             <  4:215138‑M1/7‑1 (MQ=255)          aGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGAc                                                                                                                                         <  5:40191/149‑1 (MQ=255)                         gCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTg                                                                                                                          >  2:291411/1‑149 (MQ=255)                                 gTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGttt                                                                                                                           >  8:132107/1‑140 (MQ=255)                                 gTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGttt                                                                                                                           <  7:132107/140‑1 (MQ=255)                                    gCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGc                                                                                                               <  1:247590/149‑1 (MQ=255)                                      cATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCg                                                                                                             <  2:95557/149‑1 (MQ=255)                                              gCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACg                                                                                                                                        >  2:287843/1‑114 (MQ=255)                                              gCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACg                                                                                                                                        <  1:287843/114‑1 (MQ=255)                                                       tcgcgcggatctcgcggggccgcaccatccgcgagatcatcatgacgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCcca                                                                                             >  3:215138‑M1/94‑148 (MQ=255)                                                         gAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTcc                                                                                                                   <  6:154917/124‑1 (MQ=255)                                                         gAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTcc                                                                                                                   >  5:154917/1‑124 (MQ=255)                                                           gcggatctcgcggggccgcaccatccgcgagatcatcatgacgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGCTGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCTGTACCGCCCACcaca                                                                                        >  6:305802‑M1/90‑149 (MQ=255)                                                           aaCTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACcaca                                                                                        <  4:241194/149‑1 (MQ=255)                                                              ttAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTg                                                                                                                          <  6:116338/112‑1 (MQ=255)                                                              ttAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTg                                                                                                                          >  5:116338/1‑112 (MQ=255)                                                                   aacaggaacagCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCACCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAAc                                                                                  >  5:9691/1‑147 (MQ=255)                                                                        gaacagCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACa                                                                           >  1:121456/1‑149 (MQ=255)                                                                          acagCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATg                                                                         >  4:276071/1‑149 (MQ=255)                                                                           cagCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCccac                                                                                            >  2:236228/1‑129 (MQ=255)                                                                           cagCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCccac                                                                                            <  1:236228/129‑1 (MQ=255)                                                                                                   acgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCcca                                                                                             <  4:199595‑M1/55‑1 (MQ=255)                                                                                                   acgctgtcgatcatcgcaccgctggtgaccatgttctggttcactgtggTGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCcca                                                                                             >  3:199595‑M1/50‑104 (MQ=255)                                                                                                     gCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGc                                              <  2:121456/149‑1 (MQ=255)                                                                                                         gTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGc                                                                                                <  6:157134/95‑1 (MQ=255)                                                                                                         gTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGc                                                                                                >  5:157134/1‑95 (MQ=255)                                                                                                             tGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATc                                                    >  2:93706/1‑135 (MQ=255)                                                                                                             tGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATc                                                    <  1:93706/135‑1 (MQ=255)                                                                                                                     tCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTcgc                              >  6:118400/1‑149 (MQ=255)                                                                                                                     tCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTcgc                              >  3:18505/1‑149 (MQ=255)                                                                                                                       ccAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTcgcg                             >  5:124018/1‑148 (MQ=255)                                                                                                                             gcagGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTg                      <  3:276071/149‑1 (MQ=255)                                                                                                                              cagGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCgatgat                                                     <  4:742/117‑1 (MQ=255)                                                                                                                              cagGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCgatgat                                                     >  3:742/1‑117 (MQ=255)                                                                                                                                 gTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATg                         >  3:16775/1‑142 (MQ=255)                                                                                                                                 gTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATg                         <  4:16775/142‑1 (MQ=255)                                                                                                                                    ttCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGCCAGCGTCATGATGATCTCGCGGATGGTGCGGcccc               >  2:301615/1‑149 (MQ=255)                                                                                                                                      cAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCcgc             >  6:170596/1‑149 (MQ=255)                                                                                                                                      cAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCcgc             >  1:197477/1‑149 (MQ=255)                                                                                                                                         gCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCcgc             >  5:85994/1‑146 (MQ=255)                                                                                                                                           ttGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCat                                         <  1:75544/116‑1 (MQ=255)                                                                                                                                           ttGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCat                                         >  2:75544/1‑116 (MQ=255)                                                                                                                                                  cATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCcgcgc  >  2:57380/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCTAGTGGCAGGTTCTGCGTCACTCCCAGCAGCAGGTCTTCAGGCTTGGCGCCATGGGCGGTGACGCTGCCTGGCGTTTGCAGCTCCAGGCCGATCCCGGTACCGCCCACCACAGTGAACCAGAACATGGTCACCAGCGGTGCGATGATCGACAGCGTCATGATGATCTCGCGGATGGTGCGGCCCCGCGAGATCCGCGC  >  NC_002947/3082731‑3083023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.