| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3102027 = | 32 (0.650) | 3 (0.060) | 3/246 | NT | 9.6% | coding (661/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 3102071 = | 26 (0.550) | coding (705/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
CGCTTCATTTGTTCGACTCCTTGGAGTGGCTGCCGATATAGCGGCGAATGACTGGCAGTTGCTTGCGTAGAGCGCGATCGACCATGCCCGGCAACATGCCGTTGATACGCACGAAGAGCTTTTCCGGCCACCCCAGGTAAAGCTCGGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3102177‑3102027‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTGGCATTTGCACCCTTCACCT > NC_002947/3102071‑3102218 CGCTTCATTTGTTCGACTCCTTGGAGTGGCTGCCGATATAGCGGCGAATGACTGGCAGTTGCTTGCGTAGAGCGCGATCGACCATGCCCGGCAACATGCCGTTGATACGCACGAAGAGCTTTTCCGGCCACCCCAGGTAAAGCTCGGTG > 8:211224/1‑149CGCTTCATTTGTTCGACTCCTTGGAGTGGCTGCCGATATAGCGGCGAATGACTGGCAGTTGCTTGCGTAGAGCGCGATCGACCATGCCCGGCAACATGCCGTTGATACGCACGAAGAGCTTTTCCGGCCACCCCAGGTAAAGCTCGGT < 7:146063/148‑1 GTTGATACGCACGAAGAGCTTTTCCGGCCACCCCAGGTAAAGCTCGGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAG < 1:67602/139‑1 GTTGATACGCACGAAGAGCTTTTCCGGCCACCCCAGGTAAAGCTCGGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAG > 2:67602/1‑139 TGATACGCACGAAGAGCTTTTCCGGCCACCCCAGGTAAAGCTCGGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATTTCGGCAGCCACTCGAAGGAGTCGAACAAA > 7:258182/1‑149 GTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAAC < 1:305348/102‑1 GTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAAC > 2:305348/1‑102 GTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCTAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTGGCATTTGCACCCTTCACCT > 2:109118/1‑149 CGCTTCATTTGTTCGACTCCTTGGAGTGGCTGCCGATATAGCGGCGAATGACTGGCAGTTGCTTGCGTAGAGCGCGATCGACCATGCCCGGCAACATGCCGTTGATACGCACGAAGAGCTTTTCCGGCCACCCCAGGTAAAGCTCGGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3102177‑3102027‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTGGCATTTGCACCCTTCACCT > NC_002947/3102071‑3102218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |