| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3102027 = | 32 (0.650) | 3 (0.060) | 3/246 | NT | 9.6% | coding (661/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 3102071 = | 26 (0.550) | coding (705/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
CACGGTGAACGTGCTGTATGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACA > NC_002947/3101879‑3102168 | aggtgaagggtgcaaatgccagcaagctggcaatgaacagacgcttcatttgttcgactcctaggagtggctgccgatatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgatac > 2:109118‑M1/149‑149 (MQ=255) gTGCTGTATGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCAc < 8:90088/143‑1 (MQ=255) gTGCTGTATGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCAc > 7:90088/1‑143 (MQ=255) gTGCTGTATGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCt > 3:224263/1‑149 (MQ=255) tATGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCt > 4:197396/1‑149 (MQ=255) tATGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCt < 3:197396/149‑1 (MQ=255) aTGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCGCTCGGATTGCACCgcctgga > 1:128309/1‑138 (MQ=255) aTGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCGCTCGGATTGCACCgcctgga < 2:128309/144‑7 (MQ=255) ccccccGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTgg > 4:265700/1‑149 (MQ=255) cccccGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGc < 4:127233/149‑1 (MQ=255) cGCACAACGATGAACAGCAGCGCTGTGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCtt > 6:241571/1‑149 (MQ=255) gCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTc > 8:219731/1‑149 (MQ=255) acaACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGt < 6:64051/149‑1 (MQ=255) acaACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGt < 7:219731/149‑1 (MQ=255) tttgttcgactccttcgagtggctgccgaaatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCa > 7:258182‑M1/101‑149 (MQ=255) gttcgactccttggagtggctgccgatatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCAc > 2:305348‑M1/98‑102 (MQ=255) gttcgactccttggagtggctgccgatatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCAc < 1:305348‑M1/5‑1 (MQ=255) cttggagtggctgccgatatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAAc < 1:67602‑M1/51‑1 (MQ=255) cttggagtggctgccgatatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAAc > 2:67602‑M1/89‑139 (MQ=255) gCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCa < 6:237252/142‑1 (MQ=255) gCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCa > 5:237252/1‑142 (MQ=255) gcTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATgg > 3:64668/1‑149 (MQ=255) cTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGt < 2:102314/149‑1 (MQ=255) tcaaGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATc < 4:224263/149‑1 (MQ=255) gcgcTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCgcgc < 7:232115/149‑1 (MQ=255) cgcTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGct < 6:193073/149‑1 (MQ=255) gTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACgcaa < 5:241571/149‑1 (MQ=255) ttGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACgcaag > 1:304926/1‑149 (MQ=255) tGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGctct < 5:288072/136‑1 (MQ=255) tGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGctct > 6:288072/1‑136 (MQ=255) acgacCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCtt < 5:179586/88‑1 (MQ=255) acgacCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCtt > 6:179586/1‑88 (MQ=255) ggACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTcgcc < 2:304926/149‑1 (MQ=255) tCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTc > 1:111451/1‑148 (MQ=255) cAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCaa < 4:64668/149‑1 (MQ=255) tGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTc > 1:10945/1‑148 (MQ=255) aaTCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGACAGCCACTCCAAGGAGTCGAAc < 3:309154/149‑1 (MQ=255) tCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATgg > 6:55346/1‑76 (MQ=255) tCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATgg < 5:55346/76‑1 (MQ=255) tCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACa > 5:303474/1‑148 (MQ=255) cGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAg < 7:135236/139‑1 (MQ=255) cGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAg > 8:135236/1‑139 (MQ=255) | CACGGTGAACGTGCTGTATGCCGCCCCCCGGGCGACCCGCACAACGATGAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACA > NC_002947/3101879‑3102168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |