| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3102027 = | 32 (0.650) | 3 (0.060) | 3/246 | NT | 9.6% | coding (661/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 3102071 = | 26 (0.550) | coding (705/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
GAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTGGCATTTGCACCCTTCACCT > NC_002947/3101927‑3102218 | tttgttcgactccttcgagtggctgccgaaatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCa > 7:258182‑M1/101‑149 (MQ=255) cttggagtggctgccgatatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAAc < 1:67602‑M1/51‑1 (MQ=255) cttggagtggctgccgatatagcggcgaatgactggcagttgcttgcgtagagcgcgatcgaccatgcccggcaacatgccgttgataCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAAc > 2:67602‑M1/89‑139 (MQ=255) gCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCa < 6:237252/142‑1 (MQ=255) gCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCa > 5:237252/1‑142 (MQ=255) gcTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATgg > 3:64668/1‑149 (MQ=255) cTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGt < 2:102314/149‑1 (MQ=255) tcaaGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATc < 4:224263/149‑1 (MQ=255) gcgcTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCgcgc < 7:232115/149‑1 (MQ=255) cgcTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGct < 6:193073/149‑1 (MQ=255) gTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACgcaa < 5:241571/149‑1 (MQ=255) ttGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACgcaag > 1:304926/1‑149 (MQ=255) tGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGctct > 6:288072/1‑136 (MQ=255) tGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGctct < 5:288072/136‑1 (MQ=255) ggACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTcgcc < 2:304926/149‑1 (MQ=255) tCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTc > 1:111451/1‑148 (MQ=255) cAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCaa < 4:64668/149‑1 (MQ=255) tGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTc > 1:10945/1‑148 (MQ=255) aaTCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGACAGCCACTCCAAGGAGTCGAAc < 3:309154/149‑1 (MQ=255) gttgatacgcacgaagagcttttccggccaccccaggtaaagctcggtgcgTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAg > 2:67602‑M2/52‑139 (MQ=255) gttgatacgcacgaagagcttttccggccaccccaggtaaagctcggtgcgTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAg < 1:67602‑M2/88‑1 (MQ=255) tCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATgg < 5:55346/76‑1 (MQ=255) tCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATgg > 6:55346/1‑76 (MQ=255) tCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACa > 5:303474/1‑148 (MQ=255) tgatacgcacgaagagcttttccggccaccccaggtaaagctcggtgcgTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATTTCGGCAGCCACTCGAAGGAGTCGAACaaa > 7:258182‑M2/50‑149 (MQ=255) cGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAg > 8:135236/1‑139 (MQ=255) cGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAg < 7:135236/139‑1 (MQ=255) CACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCg > 8:211224‑M1/1‑149 (MQ=255) ACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCg < 7:146063‑M1/148‑1 (MQ=255) tACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCa < 6:303474/147‑1 (MQ=255) aCCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCAtt < 3:254570/148‑1 (MQ=255) ccGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCg < 6:278039/94‑1 (MQ=255) ccGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCg > 5:278039/1‑94 (MQ=255) ccGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTg < 2:10945/149‑1 (MQ=255) cGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTGGCATTTGCACCCtt > 1:49929/1‑149 (MQ=255) gtgcgTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAAc < 1:305348‑M2/97‑1 (MQ=255) gtgcgTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAAc > 2:305348‑M2/6‑102 (MQ=255) gTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCTAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTGGCATTTGCACCCTTCACCt > 2:109118‑M2/2‑149 (MQ=255) | GAACAGCAGCGCTGCGACTGCGCTCAATCAAGCGCTGAAAGTTGGTATGGACGACCCGGCGGACGTCGCCCGTGCTGTGCTCCAGGCGGTGCAATCCGAGCGCACCGAGCTTTACCTGGGGTGGCCGGAAAAGCTCTTCGTGCGTATCAACGGCATGTTGCCGGGCATGGTCGATCGCGCTCTACGCAAGCAACTGCCAGTCATTCGCCGCTATATCGGCAGCCACTCCAAGGAGTCGAACAAATGAAGCGTCTGTTCATTGCCAGCTTGCTGGCATTTGCACCCTTCACCT > NC_002947/3101927‑3102218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |