| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3102530 | 40 (0.810) | 4 (0.090) | 4/238 | NT | 9.4% | coding (361/642 nt) | PP_2712 | hypothetical protein |
| ? | NC_002947 | = 3102550 | 40 (0.870) | coding (381/642 nt) | PP_2712 | hypothetical protein | |||||
TGGGAGGGCATCATCAACAGCAGTTGGGCGGGGGCGACGGGTGGCCTCGGTGCACTGGGCAAGGTCAAGGCGGCGAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3102386‑3102530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcctggCACCTGGTCATACAGCGTGCCCAGGCTGGTGTAAGCCGAACCTTGCAGGGCGGCGGGGTCCAATTTCATGGCCTGCTCCAGGCTAGCTTTCGCCGCCTTGACCTTGCCCAGTGCACCGAGGCCACCCGTCGCCCCCGCCCAACTGCT < NC_002947/3102550‑3102404 TGGGAGGGCATCATCAACAGCAGTTGGGCGGGGGCGACGGGTGGCCTCGGTGCACTGGGCAAGGTCAAGGCGGCGAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTG < 3:150467/144‑1TGGGAGGGCATCATCAACAGCAGTTGGGCGGGGGCGACGGGTGGCCTCGGTGCACTGGGCAAGGTCAAGGCGGCGAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTG > 4:150467/1‑144 CTCGGTGCACTGGGCAAGGTCAAGGCGGCGAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTGGCACCTGGTCATACAGCGTGCCCAGGC < 3:39747/126‑1 CTCGGTGCACTGGGCAAGGTCAAGGCGGCGAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTGGCACCTGGTCATACAGCGTGCCCAGGC > 4:39747/1‑126 GAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTGGCACCTGGTCATACAGCGTGCCCA < 7:62515/94‑1 GAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTGGCACCTGGTCATACAGCGTGCCCA > 8:62515/1‑94 CCAGCCTGGCACCTGGTCATACAGCGTGCCCAGGCTGGTGTAAGCCGAACCTTGCAGGGCGGCGGGGTCCAATTTCATGGCCTGCTCCAGGCTAGCTTTCGCCGCCTTGACCTTGCCCAGTGCACCGAGGCCACCCGTCGCCCCCGCC > 2:135667/1‑148 CAGCCTGGCACCTGGTCATACAGCGTGCCCAGGCTGGTGTAAGCCGAACCTTGCAGGGCGGCGGGGTCCAATTTCATGGCCTGCTCCAGGCTAGCTTTCGCCGCCTTGACCTTGCCCAGTGCACCGAGGCCACCCGTCGCCCCCGCCC > 3:146176/1‑148 TGGCACCTGGTCATACAGCGTGCCCAGGCTGGTGTAAGCCGAACCTTGCAGGGCGGCGGGGTCCAATTTCATGGCCTGCTCCAGGCTAGCTTTCGCCGCCTTGACCTTGCCCAGTGCACCGAGGC > 1:161911/1‑125 TGGCACCTGGTCATACAGCGTGCCCAGGCTGGTGTAAGCCGAACCTTGCAGGGCGGCGGGGTCCAATTTCATGGCCTGCTCCAGGCTAGCTTTCGCCGCCTTGACCTTGCCCAGTGCACCGAGGC < 2:161911/125‑1 GGCACCTGGTCATACAGCGTGCCCAGGCTGGTGTAAGCCGAACCTTGCAGGGCGGCGGGGTCCAATTTCATGGCCTGCTCCAGGCTAGCTTTCGCCGCCTTGACCTTGCCCAGTGCACCGAGGCCACCCGTCGCCCCCGCCCAACTGCT > 2:5763/1‑149 TGGGAGGGCATCATCAACAGCAGTTGGGCGGGGGCGACGGGTGGCCTCGGTGCACTGGGCAAGGTCAAGGCGGCGAAAGCTAGCCTGGAGCAGGCCATGAAATTGGACCCCGCCGCCCTGCAAGGTTCGGCTTACACCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3102386‑3102530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcctggCACCTGGTCATACAGCGTGCCCAGGCTGGTGTAAGCCGAACCTTGCAGGGCGGCGGGGTCCAATTTCATGGCCTGCTCCAGGCTAGCTTTCGCCGCCTTGACCTTGCCCAGTGCACCGAGGCCACCCGTCGCCCCCGCCCAACTGCT < NC_002947/3102550‑3102404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |