New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3126029	49 (0.990)	4 (0.080)	4/246	NT	8.6%	coding (241/594 nt)	PP_2743	GNAT family acetyltransferase
	?	NC_002947	= 3126058	38 (0.800)					coding (212/594 nt)	PP_2743	GNAT family acetyltransferase

GGCGTGGCGAAGAAACTCGGCACCCAGCCCCTGGCTCCGCCAGGCCTCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3125880‑3126029 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgTCATCGGCATGATGCATAGCTATGCCTTGCGCGCAACGCC  <  NC_002947/3126058‑3126019                                                                                                                                                                                                GGCGTGGCGAAGAAACTCGGCACCCAGCCCCTGGCTCCGCCAGGCCTCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGC                                             <  7:160600/147‑1                        CCAGCCCCTGGCTCCGCCAGGCCTCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGTCGTCGGCATGATGGCTAGCTA                    >  8:251616/1‑149                                    TCCGCCAGGCCTCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGTCATCGGCATGATGCATAGCTATGCCTTGCGCG         >  5:164613/1‑148                                         CAGGCCTCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGCAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGTCATCGGCATGATGCATAGCTATGCCTTGCGCGCAACGC   <  7:251616/149‑1                                          AGGCCTCATCCTGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGTCATCGGCATGATGCATAGCTATGCCTTGCGCGCAACGCC  <  6:164613/149‑1                                                                                                                                                                                                GGCGTGGCGAAGAAACTCGGCACCCAGCCCCTGGCTCCGCCAGGCCTCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3125880‑3126029 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgTCATCGGCATGATGCATAGCTATGCCTTGCGCGCAACGCC  <  NC_002947/3126058‑3126019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.