New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3126029	49 (0.990)	4 (0.080)	4/246	NT	8.6%	coding (241/594 nt)	PP_2743	GNAT family acetyltransferase
	?	NC_002947	= 3126058	38 (0.800)					coding (212/594 nt)	PP_2743	GNAT family acetyltransferase

TCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCTTGCTCCATATGTAATCGGCCATGCCCTCCGATG  >  NC_002947/3125926‑3126202                                                                                                                                     |                                                                                                                                                 tCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGt                                                                                                                                  >  3:290160/1‑149 (MQ=255) tCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGt                                                                                                                                  >  6:263029/1‑149 (MQ=255)   aTCCAGTGCCAGGGTTGATTTGTTCTAGGTATCGGGTATATCCATGTCGGAATAAGTCGCGAGGACGGGGTCGGTCTCGACTGGCGTGTCAGGCGTTGCGCGGAAGGCATAGCTATGCATGATTCCGATGACGCGCCCTTCGAAtgtg                                                                                                                                 <  8:174961/148‑1 (MQ=255)         tGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCAt                                                                                                                            >  7:220075/1‑147 (MQ=255)         tGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCa                                                                                                                          <  5:263029/149‑1 (MQ=255)                     tatGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTg                                                                                                               <  2:296174/148‑1 (MQ=255)                     tatGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTg                                                                                                               >  3:125437/1‑148 (MQ=255)                     tatGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGt                                                                                                              <  4:125437/149‑1 (MQ=255)                       tGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTa                                                                                                             <  1:76290/148‑1 (MQ=255)                       tGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCACTTCGAAAGTGGCCATCAGGCCGTTCTTGTa                                                                                                             <  1:193949/148‑1 (MQ=255)                         tACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATg                                                                                                           >  1:147478/1‑148 (MQ=255)                          aCAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCa                                                                                                                          <  1:91246/132‑1 (MQ=255)                          aCAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCa                                                                                                                          >  2:91246/1‑132 (MQ=255)                               gTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTc                                                                                                    >  6:223773/1‑149 (MQ=255)                                  tCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGcc                                                                                                 <  5:220126/149‑1 (MQ=255)                                     ggTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTg                                                                                              >  6:275859/1‑149 (MQ=255)                                                 tCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCTTa                                                                                  <  4:290160/149‑1 (MQ=255)                                                   ggAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTg                                                                                                                                 >  6:139726/1‑100 (MQ=255)                                                   ggAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTg                                                                                                                                 <  5:139726/100‑1 (MQ=255)                                                    gAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGc                                                                                >  4:254937/1‑148 (MQ=255)                                                                     ggggTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCa                                                              <  6:105250/149‑1 (MQ=255)                                                                           ggtcTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCa                                                                                                                      <  1:80639/87‑1 (MQ=255)                                                                           ggtcTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCa                                                                                                                      >  2:80639/1‑87 (MQ=255)                                                                           ggtcTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAgg                                                        <  8:190980/149‑1 (MQ=255)                                                                            gtcTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGt                                                       <  7:210364/149‑1 (MQ=255)                                                                              ctcGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGttt                                                     >  3:66985/1‑149 (MQ=255)                                                                                 gACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGttt                                                     <  3:254937/146‑1 (MQ=255)                                                                                 gACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTtc                                                    <  2:147478/147‑1 (MQ=255)                                                                                           tCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTgcggc                                        <  5:275859/149‑1 (MQ=255)                                                                                            cAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAgg                                                        >  5:220261/1‑132 (MQ=255)                                                                                            cAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAgg                                                        <  6:220261/132‑1 (MQ=255)                                                                                              ggCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGAcgcgcaacgcctgacaggccagtcgagaccgaccccgtcctcgcgccttattccgacatggaaatacccgataccttgtacatatccagcctggcacaggatgaggcct                                     <  6:164613‑M2/149‑110 (MQ=255)                                                                                               gCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGAcgcgcaacgcctgacaggccagtcgagaccgaccccgtcctcgcgccttattgcgacatggaaatacccgataccttgtacatatccagcctggcactggatgaggcctg                                    <  7:251616‑M2/149‑111 (MQ=255)                                                                                                 gTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCtt                                  <  4:66985/149‑1 (MQ=255)                                                                                                  ttGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCTTg                                 <  2:84051/149‑1 (MQ=255)                                                                                                     cgcgcAAGGCATAGCTATGCATCATGCCGATGAcgcgcaacgcctgacaggccagtcgagaccgaccccgtcctcgcgccttattccgacatggaaatacccgataccttgtacatatccagcctggcactggatgaggcctggcgga                               >  5:164613‑M2/1‑33 (MQ=255)                                                                                                      gcgcAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCTTGCTcc                             <  8:220075/149‑1 (MQ=255)                                                                                                           aGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCTTGCTCCATATg                        <  5:138259/149‑1 (MQ=255)                                                                                                                tagctagcCATCATGCCGACGAcgcgcaacgcctgacaggccagtcgagaccgaccccgtcctcgcgccttattccgacatggaaatacccgataccttgtacatatccagcctggcactggatgaggcctggcggagccaggggctgg                   >  8:251616‑M2/1‑22 (MQ=255)                                                                                                                      tGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCTTGCTCCATATGTAATCGGcc               <  6:138314/147‑1 (MQ=255)                                                                                                                                cGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCgaga                                                                            <  7:170925/76‑1 (MQ=255)                                                                                                                                cGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCgaga                                                                            >  8:170925/1‑76 (MQ=255)                                                                                                                                 gATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCTTGCTCCATATGTAATCGGCCATGCCCTCCGATg  >  2:187565/1‑149 (MQ=255)                                                                                                                                     |                                                                                                                                                 TCATCCAGTGCCAGGCTGGATATGTACAAGGTATCGGGTATTTCCATGTCGGAATAAGGCGCGAGGACGGGGTCGGTCTCGACTGGCCTGTCAGGCGTTGCGCGCAAGGCATAGCTATGCATCATGCCGATGACGCGCCCTTCGAAAGTGGCCATCAGGCAGTTCTTGTATGAAAAGTCGCCCTGTTCTCTGGCATAGCGAGACGCACCGACACTCAGCAAGGTTTCTCCAGGTGCGGCGAGCTTGCTCCATATGTAATCGGCCATGCCCTCCGATG  >  NC_002947/3125926‑3126202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.