| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3198090 = | 35 (0.710) | 3 (0.060) | 3/248 | NT | 7.9% | coding (567/1527 nt) | ethA | FAD‑containing monooxygenase EthA |
| ? | NC_002947 | 3198123 = | 36 (0.750) | coding (534/1527 nt) | ethA | FAD‑containing monooxygenase EthA | |||||
TGCCGCTGGCTGTTCAGTGCAGGCGGTTACTATCGCTATGATCAGGGCTTCAGCCCCCGGTTCGAAGGCAGCGAACAGTTCAAGGGCCAGATCATCCATCCGCAACACTGGCCGGAAGACCTCGACTACACCGGCAAGCGCGTCGTGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3198239‑3198090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcTTCCGGCCAGTGTTGCGGATGGATGATCTGGCCCTTGAACTGTTCGCTGCCTTCGAACCGGGGGCTGAAGCCCTGATCATAGCGATAGTAACCGCCTGCACTGAACAGCCAGCGGCATTCGACCGTGCGGATCTGCGCCGTGCGG > NC_002947/3198123‑3198267 TGCCGCTGGCTGTTCAGTGCAGGCGGTTACTATCGCTATGATCAGGGCTTCAGCCCCCGGTTCGAAGGCAGCGAACAGTTCAAGGGCCAGATCATCCATCCGCAACACTGGCCGGAAGACCTCGACTACACCGGCAAGCGCGTCGTGGT < 7:693/149‑1 GCTTCAGCCCCCGGTTCGAAGGCAGCGAACAGTTCAAGGGCCAGATGATCGATCCTCAACACTGGCCGGAAGACGTCGACTACACCGGCAAGCGCGTCGTGGT < 5:195861/103‑1 CACTGGCCGGAAGACCTCGACTACACCGGCAAGCGCGTCGTGGTCTTCCGGCCAGTGTTGCGGATGGATGATCTGGCCCTTGAACTGTTCGCTGCCTTCGAACCGGGGGCTGAAGCCCTGATCATAGCGATAGTAACCGCCTGCACTG > 8:194661/1‑148 CGGAAGACCTCGACTACACCGGCAAGCGCGTCGTGGTCTTCCGGCCAGTGTTGCGGATGGATGATCTGGCCCTTGAACTGTTCGCTGCCTTCGAACCGGGGGCTGAAGCCCTGATCATAGCGAT < 3:8054/124‑1 CGGAAGACCTCGACTACACCGGCAAGCGCGTCGTGGTCTTCCGGCCAGTGTTGCGGATGGATGATCTGGCCCTTGAACTGTTCGCTGCCTTCGAACCGGGGGCTGAAGCCCTGATCATAGCGAT > 4:8054/1‑124 GGTCTTCCGGCCAGTGTTGCGGATGGATGATCTGGCCCTTGAACTGTTCGCTGCCTTCGAACCGGGGGCTGAAGCCCTGATCATAGCGCTAGTAACCGCCTGCACTGAACAGCCAGCGGCATTCGACCGTGCGGATCTGCGCCGTGCGG < 7:167024/149‑1 TGCCGCTGGCTGTTCAGTGCAGGCGGTTACTATCGCTATGATCAGGGCTTCAGCCCCCGGTTCGAAGGCAGCGAACAGTTCAAGGGCCAGATCATCCATCCGCAACACTGGCCGGAAGACCTCGACTACACCGGCAAGCGCGTCGTGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3198239‑3198090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcTTCCGGCCAGTGTTGCGGATGGATGATCTGGCCCTTGAACTGTTCGCTGCCTTCGAACCGGGGGCTGAAGCCCTGATCATAGCGATAGTAACCGCCTGCACTGAACAGCCAGCGGCATTCGACCGTGCGGATCTGCGCCGTGCGG > NC_002947/3198123‑3198267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |