New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3241224	40 (0.810)	4 (0.090)	4/242	NT	9.1%	coding (920/1650 nt)	PP_2838	hypothetical protein
	?	NC_002947	= 3241320	42 (0.900)					coding (1016/1650 nt)	PP_2838	hypothetical protein

CCAACAATGCGAGCGGCTGGGTGAATGGGACCTGGCCACGGCGGTGTATGCGCAATGCAACCATCCCCAGGCGCGCATTCGCCAGGTGAGGGTGCTGGAGCGCAGCGAACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3241072‑3241224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggcGTGGTGCGCTGGCGCCGCTGTGGCGGGCCGCCGAGCTTGCGCGCCAGGCGTGGCAGCATGCGTTGCAGCGCCTGCTCCTCCAGCGCATTGGCAGGTGCCGCTGCCAGTTGCAACGCCCGTGCATGGGCCTGGTGCCACTGT  <  NC_002947/3241320‑3241180                                                                                                                                                                                                                                                                                                        CCAACAATGCGAGCGGCTGGGTGAATGGGACCTGGCCACGGCGGTGTATGCGCAATGCAACCATCCCCAGGCGCGCATTCGCCAGGTGAGGGTGCTGGAGCGCAGCGAACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAG                                                                                                                                                   >  4:300082/1‑149  CAACAATGCGAGCGGCTGGGTGAATGGGACCTGGCCACGGCGGTGTATGCGCAATGCAACCATCCCCAGGCGCGCATTCGCCAGGTGAGGGTGCTGGAGCGCAGCGAACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGC                                                                                                                                                  >  2:71763/1‑149  CAACAATGCGAGCGGCTGGGTGAATGGGACCTGGCCACGGCGGTGTATGCGCAATGCAACCATCCCCAGGCGCGCATTCGCCAGGTGAGGGTGCTGGAGCGCAGCGAACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGC                                                                                                                                                  >  8:225549/1‑149                                                                                        GAGGGTGCTGGAGCGCAGCGAACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGCGGCGTGGTGCGCTGGCGCCGCTGTGGCGGGCCGCCGAGCTTGCGCGCCAGGCGTGGCAGCTTGCGTTGCAGCGCCTGCTCCTCCAG                                                            >  5:108841/1‑149                                                                                                             ACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGCGGCGTGGTGCGCTGGCGCCGCTGTGGCGGGCCGCCGAGCTTGCGCGCCAGGCGTGGCAGCTTGCGTTGCAGCGCCTGCTCCTCCAGCGCATTGGCAGGTGCCGCTGC                                       <  6:108841/149‑1                                                                                                             ACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGCGGCGTGGTGCGCTGGCGCCGCTGTGGCGGGCCGCCGAGCTTGCGCGCCAGGCGTGGCAGCATGCGTTGCAGCGCCTGCTCCTCCAGCGCATTGGCAGGTGCCGCTGC                                       >  3:224817/1‑149                                                                                                              CAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGCGGCGTGGTGCGCTGGCGCCGCTGTGGCGGGCCGCCGAGCTTGCGCGCCAGGCGTGGCAGCATGCGTTGCAGCGCCTGCTCCTCCAGCGCATTGGCAGGTGCCGCTGCC                                      <  4:224817/149‑1                                                                                                                                                   CAGCGGCGTGGTGCGCTGGCGCCGCTGTGGCGGGCCGCCGAGCTTGCGCGCCAGGCGTGGCAGCATGCGTTGCAGCGCCTGCTCCTCCAGCGCATTGGCAGGTGCCGCTGCCAGTTGCAACGCCCGTGCATGGGCCTGGTGCCACTGT  <  5:43263/148‑1                                                                                                                                                                                                                                                                                                        CCAACAATGCGAGCGGCTGGGTGAATGGGACCTGGCCACGGCGGTGTATGCGCAATGCAACCATCCCCAGGCGCGCATTCGCCAGGTGAGGGTGCTGGAGCGCAGCGAACAGTGGCACCAGGCCCATGCACGGGCGTTGCAACTGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3241072‑3241224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggcGTGGTGCGCTGGCGCCGCTGTGGCGGGCCGCCGAGCTTGCGCGCCAGGCGTGGCAGCATGCGTTGCAGCGCCTGCTCCTCCAGCGCATTGGCAGGTGCCGCTGCCAGTTGCAACGCCCGTGCATGGGCCTGGTGCCACTGT  <  NC_002947/3241320‑3241180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.