New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3402153 = | 33 (0.670) | 3 (0.060) | 3/242 | NT | 8.3% | coding (46/369 nt) | PP_3010 | hypothetical protein |
? | NC_002947 | 3402180 = | 35 (0.750) | coding (73/369 nt) | PP_3010 | hypothetical protein |
CCAGCGGTATAATCGTGGCTGTCACGCACATCAGGGTTTTGTGCGCAGCCTGCGACGAACAACGAGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3402223‑3402153 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctgcGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGC > NC_002947/3402180‑3402257 CCAGCGGTATAATCGTGGCTGTCACGCACATCAGGGTTTTGTGCGCCGCCTGCGACGCACAACGCGGCTGCGCCCAAAACCCGGATGTGCGTGGCAGCCACGATTATACCGCTGGCACGAACGTGAAAAGCCCACCCGCTTATCTGGGC > 4:271819/1‑149 GCGCAGCCTGCGACGAACAACGAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGG < 3:163264/105‑1 GCGCAGCCTGCGACGAACAACGAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGG > 4:163264/1‑105 CCAGCGGTATAATCGTGGCTGTCACGCACATCAGGGTTTTGTGCGCAGCCTGCGACGAACAACGAGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3402223‑3402153 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctgcGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGC > NC_002947/3402180‑3402257 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |