New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3402153 =	33 (0.670)	3 (0.060)	3/242	NT	8.3%	coding (46/369 nt)	PP_3010	hypothetical protein
	?	NC_002947	3402180 =	35 (0.750)					coding (73/369 nt)	PP_3010	hypothetical protein

TTGTAGTTGAGCAGTAACATGGGCAGGACAAAAACCAAAAAAGGGGCAGGCTGCTTGGCAACATTTCCCAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAACCTAT  >  NC_002947/3402008‑3402296                                                                                                                                                  |                                                                                                                                                ttgtAGTTGAGCAGTAACATGGGCAGGACAAAAACCAAAAAAGGGGCAGGCTGCTTGGCAACATTTCCCAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAg                                                                                                                                              <  8:196481/149‑1 (MQ=255)      gTTGAGCAGTAACATGGGCAGGACAAAAACCAAAAAAGGGGCAGGCTGCTTGGCAACATTTCCCAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTc                                                                                                                                          <  4:222879/148‑1 (MQ=255)                           gACAAAAACCAAAAAAGGGGCAGGCTGCTTGGCAACATTTCCCAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGca                                                                                                                    >  6:80803/1‑149 (MQ=255)                                   ccAAAAAAGGGGCAGGCTGCTTGGCAACATTTCCCAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAAccc                                                                                                            <  6:166620/149‑1 (MQ=255)                                                         ggCAACATTTCCCAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGa                                                                                       <  5:80803/148‑1 (MQ=255)                                                                   cccAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCt                                                                             <  3:87893/148‑1 (MQ=255)                                                                    gcccagataagcgggtgggcttttcacgttcgtgccagcggtataatcgtggctgccacgcacatccgggttttgggcGCAGCCGCGTTGTGCGTCGCAGGCGGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTgg                                                                           >  4:271819‑M1/79‑149 (MQ=255)                                                                     cAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTgg                                                                           >  8:214368/1‑148 (MQ=255)                                                                     cAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTgg                                                                           >  3:263196/1‑148 (MQ=255)                                                                      ccagataagcgggtgggcttttcacggtagtgccagcggtataatcgtggctgtcacgcacatcagggttttgtgcGCAGCCTCGTTGTTCGTCGCAGGCTgcgc                                                                                                                     <  3:163264‑M1/29‑1 (MQ=255)                                                                      ccagataagcgggtgggcttttcacggtagtgccagcggtataatcgtggctgtcacgcacatcagggttttgtgcGCAGCCTCGTTGTTCGTCGCAGGCTgcgc                                                                                                                     >  4:163264‑M1/77‑105 (MQ=255)                                                                             gATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGt                                                                  >  2:54037/1‑149 (MQ=255)                                                                                 gggCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAAccc                                                                                                            <  6:96305/103‑1 (MQ=255)                                                                                   gCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCgttgt                                                                                                                                     >  6:151928/1‑76 (MQ=255)                                                                                   gCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCgttgt                                                                                                                                     <  5:151928/76‑1 (MQ=255)                                                                                   gCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGACTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTAAACCGCTGGCACTACCGTGAAAAg                                                            >  1:189538/1‑149 (MQ=255)                                                                                       cAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGcc                                                          <  1:54037/147‑1 (MQ=255)                                                                                          gAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGc                                                                          >  8:266691/1‑128 (MQ=255)                                                                                          gAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGc                                                                          <  7:266691/128‑1 (MQ=255)                                                                                              gtgtCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCt                                                  >  6:273979/1‑148 (MQ=255)                                                                                                   gcgTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCt                                             <  5:273979/148‑1 (MQ=255)                                                                                                        aaaaaCTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTg                                       >  1:10451/1‑149 (MQ=255)                                                                                                             cTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTc                                   >  5:159876/1‑148 (MQ=255)                                                                                                              tCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGACCACCCGCTTATCTGGGCTGCGTCa                                  >  4:125992/1‑148 (MQ=255)                                                                                                                aaGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAg                               >  2:10907/1‑149 (MQ=255)                                                                                                                  gATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGc                             >  8:269915/1‑149 (MQ=255)                                                                                                                      gCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAg                          <  7:214368/148‑1 (MQ=255)                                                                                                                          gCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCt                                             <  1:194859/125‑1 (MQ=255)                                                                                                                          gCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCt                                             >  2:194859/1‑125 (MQ=255)                                                                                                                              gTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCAACCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAgg                  >  6:149021/1‑148 (MQ=255)                                                                                                                                gCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGaa               >  5:222452/1‑149 (MQ=255)                                                                                                                                    tACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAAtgtg           <  6:159876/149‑1 (MQ=255)                                                                                                                                      cTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGa          >  1:25275/1‑148 (MQ=255)                                                                                                                                         gTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAAc      <  4:263196/149‑1 (MQ=255)                                                                                                                                         gTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAAc      >  1:311283/1‑149 (MQ=255)                                                                                                                                            aTCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAACCTa   >  5:224108/1‑149 (MQ=255)                                                                                                                                            aTCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAACCTa   >  4:274149/1‑149 (MQ=255)                                                                                                                                             tCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAACCTAt  <  6:224108/149‑1 (MQ=255)                                                                                                                                             tCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAACCTAt  <  7:269915/149‑1 (MQ=255)                                                                                                                                              cGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAACCTAt  >  8:93148/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                TTGTAGTTGAGCAGTAACATGGGCAGGACAAAAACCAAAAAAGGGGCAGGCTGCTTGGCAACATTTCCCAGTTTTCGATGGGGCTGCAGGAGCGTGTCGCGTGAAAAACTCAAGATCGCTGGCAGGTGCAATACTGGTAATCGGGGCAGCCTCGTTGTTCGTCGCAGGCTGCGCACAAAACCCTGATGTGCGTGACAGCCACGATTATACCGCTGGCACTACCGTGAAAAGCCCACCCGCTTATCTGGGCTGCGTCAAAGGCGAGCTACAAGGGAATGTGAAAACCTAT  >  NC_002947/3402008‑3402296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.