New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3476250	41 (0.830)	3 (0.060)	3/246	NT	6.4%	coding (463/2517 nt)	PP_3087	excinuclease ABC subunit A
	?	NC_002947	= 3476286	49 (1.030)					coding (427/2517 nt)	PP_3087	excinuclease ABC subunit A

TCGCGCAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3476141‑3476250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacgCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCATCCGTGAGCGTGCGGTGGCGGCGTGGCCAATGGCCTGGCAAGGGCAGAACCTGCGCG  <  NC_002947/3476286‑3476142                                                                                                                                                                                                                                                                 TCGCGCAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGT                                                                                                            <  7:15345/149‑1                          CCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGG                                                                                                                >  8:199216/1‑120                          CCATTGGCCACGCCGCCACCGCACGCTCACCGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGG                                                                                                                <  7:199216/120‑1                                                                                                         aatagGCCCCATGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCTCTGACCATCCGTGAGCGTTAGTTGGCGGCGTGGCCAATTGCCTGGCAAGGGCAGAACCTGCG    <  4:233930/144‑1                                                                                                          ACACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCATCCGTGAGCGTGCGGTGGCGGCGTGGCCAATGGCCTGGCAAGGGCAGAACCTGCGC   <  8:265155/149‑1                                                                                                           CACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCATCCGTGAGCGTGCGGTGGCGGCGTGGCCAATGGCCTGGCGAGGGCAGAACCTGCGCG  <  6:135259/149‑1                                                                                                           CACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCATCCGTGAGCGTGCGGTGGCGGCGTGGCCAATGGCCTGGCAAGGGCAGAACCTGCGC   >  1:172784/1‑148                                                                                                            ACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCATCCGTGAGCGTGCGGTGGCGGCGTGGCCAATGGCCTGGCAAGGGCAGAACCTGCGCG  >  8:11402/1‑148                                                                                                            ACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCAT                                                          <  7:188942/92‑1                                                                                                            ACGCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCAT                                                          >  8:188942/1‑92                                                                                                                                                                                                                                                                 TCGCGCAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3476141‑3476250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacgCCCCAGGGCGCTTGCCCGCAGTGCCATGGCCTGGGCCGTGTCTACGAGGTGACCGAAGCGACCATGGTCCCCGACCCGTCGCTGACCATCCGTGAGCGTGCGGTGGCGGCGTGGCCAATGGCCTGGCAAGGGCAGAACCTGCGCG  <  NC_002947/3476286‑3476142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.