New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 347625041 (0.830)3 (0.060) 3/246 NT 6.4% coding (463/2517 nt) PP_3087 excinuclease ABC subunit A
?NC_002947 = 3476286 49 (1.030)coding (427/2517 nt) PP_3087 excinuclease ABC subunit A

ATGTCGCGCAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCACCGAGGAACGTGCACTCGGCGTGCCGCGTTGC  >  NC_002947/3476138‑3476428
                                                                                                                                                    |                                                                                                                                              
aTGTCGCGCAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCACACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTgggg                                                                                                                                                <  7:103530/149‑1 (MQ=255)
    cgcgCAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgt                                                                                                                                             >  8:11402‑M2/1‑145 (MQ=255)
    cgcgCAGGTTCTGCCCTCGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgtg                                                                                                                                            <  6:135259‑M2/149‑5 (MQ=255)
     gcgcAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgtgt                                                                                                                                           <  8:265155‑M2/149‑6 (MQ=255)
     gcgcAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgtg                                                                                                                                            >  1:172784‑M2/1‑144 (MQ=255)
      cgcAGGTTCTGCCCTTGCCAGGCAATTGGCCACGCCGCCAACTAACGCTCACGGATGGTCAGAGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCATGGGGcctatt                                                                                                                                          <  4:233930‑M2/149‑7 (MQ=255)
       gcAGGTTCTGCCCTTGCCAGGCCATTGACCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTc                                                                                                                                         <  6:324945/149‑1 (MQ=255)
                 cccTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGaaaa                                                                                                                                 <  5:130286/147‑1 (MQ=255)
                 cccTCGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGaaaa                                                                                                                                 <  5:135259/147‑1 (MQ=255)
                        cAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGc                                                                                                                        >  3:279813/1‑149 (MQ=255)
                           gCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTa                                                                                                                     >  1:263352/1‑149 (MQ=255)
                                   ccACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCg                                                                                                             >  5:174160/1‑149 (MQ=255)
                                   ccACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCg                                                                                                             <  3:14561/149‑1 (MQ=255)
                                    cACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGc                                                                                                            <  3:163473/149‑1 (MQ=255)
                                      cgccgcCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCtt                                                                                                          <  2:263352/149‑1 (MQ=255)
                                         cgccACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGcc                                                                                                       >  4:78094/1‑149 (MQ=255)
                                          gccACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGccc                                                                                                      <  3:78094/149‑1 (MQ=255)
                                               cGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCAGCGTACAGCATCGCTTGCCcgggcg                                                                                                 >  7:297410/1‑149 (MQ=255)
                                                gCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCcgggcgg                                                                                                <  6:62345/149‑1 (MQ=255)
                                                gCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCcgggcgg                                                                                                <  4:279813/149‑1 (MQ=255)
                                                 cACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGaaaa                                                                                                                                 <  4:300782/115‑1 (MQ=255)
                                                 cACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGaaaa                                                                                                                                 >  3:300782/1‑115 (MQ=255)
                                                  aCGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGAAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCcgggcggg                                                                                               >  1:127479/1‑148 (MQ=255)
                                                            aTGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgt                                                                                                                                             <  7:188942‑M2/92‑4 (MQ=255)
                                                            aTGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgt                                                                                                                                             >  8:188942‑M2/1‑89 (MQ=255)
                                                            aTGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGt                                                                                                                      >  5:122317/1‑115 (MQ=255)
                                                            aTGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGt                                                                                                                      <  6:122317/115‑1 (MQ=255)
                                                                  aGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCggg                                                                               <  6:174160/148‑1 (MQ=255)
                                                                          gTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGt                                                                                                                               >  1:142648/1‑92 (MQ=255)
                                                                          gTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGt                                                                                                                               <  2:142648/92‑1 (MQ=255)
                                                                          gTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCa                                                                      >  3:296341/1‑149 (MQ=255)
                                                                             ggggACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCAGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGc                                                                   <  8:297410/149‑1 (MQ=255)
                                                                             ggggACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGAAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGc                                                                   <  2:127479/149‑1 (MQ=255)
                                                                             ggggACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCAGGGGAGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCATTCCCGGGCGGGAAATGGCCAGCGCGGGAATAGAGCATGc                                                                   >  3:218785/1‑149 (MQ=255)
                                                                             ggggACCATGGTCGAGGCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGc                                                                   <  1:109294/149‑1 (MQ=255)
                                                                                       gTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAAc                                                          <  7:265155/148‑1 (MQ=255)
                                                                                       gTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACt                                                         <  4:296341/149‑1 (MQ=255)
                                                                                                 tCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAggtg                                               >  7:167425/1‑149 (MQ=255)
                                                                                                  cACCTCGTAGACAAGGCAAAGGCAATGGCACAGAGTGCAAGCGCCCTGGGTCGTTTTCGGAGAAAAGTCTTCGGCGTACAGCATCGATTGCCAGTGCGGGTAATGTCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAggtg                                               <  3:233930/148‑1 (MQ=255)
                                                                                                   aCCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATg                                                                    >  8:116341/1‑126 (MQ=255)
                                                                                                   aCCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATg                                                                    <  7:116341/126‑1 (MQ=255)
                                                                                                     cTCGTAGACACGGCCCAGGCCTTGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGGATCTCTTGCCCGGGGGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAgg                                                 <  7:10745/143‑1 (MQ=255)
                                                                                                     cTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCa                                           >  4:55835/1‑149 (MQ=255)
                                                                                                     cTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGACAGCGCGGGAATAGAGCATGCGGATCGAAATGGACAAggtagatc                                           >  8:10745/1‑144 (MQ=255)
                                                                                                          aGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTa                                      >  6:215743/1‑149 (MQ=255)
                                                                                                              acGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgtgtctacgaggtgaccgaagcgaccatggtccccgacccgtcgctgaccatccgtgagcgtgcggtggcggcgtggccaatggcctggcaagggcagaacctgcgcga                                  <  7:15345‑M2/149‑111 (MQ=255)
                                                                                                                ggCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCAcc                                >  4:126202/1‑149 (MQ=255)
                                                                                                                  cccAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgtgtctacgaggtgaccgaagcgaccatggtccccgacccgtcgctgaccatcggtgagcgtgcggtggcggcgtggccaatgg                                                           <  7:199216‑M2/120‑86 (MQ=255)
                                                                                                                  cccAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGcgtgtctacgaggtgaccgaagcgaccatggtccccgacccgtcgctgaccatccgtgagcgtgcggtggcggcgtggccaatgg                                                           >  8:199216‑M2/1‑35 (MQ=255)
                                                                                                                  cccAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAggtggt                                             <  7:15503/134‑1 (MQ=255)
                                                                                                                  cccAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAggtggt                                             >  8:15503/1‑134 (MQ=255)
                                                                                                                   ccAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCcgg                                                                                                    <  4:20200/78‑1 (MQ=255)
                                                                                                                    cAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGt                                                                                                                      >  1:239515/1‑59 (MQ=255)
                                                                                                                    cAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGt                                                                                                                      <  2:239515/59‑1 (MQ=255)
                                                                                                                    cAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCACCGAgg                            <  7:270548/149‑1 (MQ=255)
                                                                                                                       gCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCACCGAGGAAc                         <  5:215743/149‑1 (MQ=255)
                                                                                                                                         aGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCACCGAGGAACGTGCACTCGGCGTGCcgc       <  1:2399/149‑1 (MQ=255)
                                                                                                                                          gcgcCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAggtgg                                              <  1:146684/109‑1 (MQ=255)
                                                                                                                                          gcgcCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAggtgg                                              >  2:146684/1‑109 (MQ=255)
                                                                                                                                          gcgcCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCACCGAGGAACGTGCACTCGGCGTGCcgcg      >  5:85866/1‑149 (MQ=255)
                                                                                                                                              ccTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCAGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCACCGAGGAACGTGCACTCGGCGTGCCGCGTtgc  >  5:284253/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
ATGTCGCGCAGGTTCTGCCCTTGCCAGGCCATTGGCCACGCCGCCACCGCACGCTCACGGATGGTCAGCGACGGGTCGGGGACCATGGTCGCTTCGGTCACCTCGTAGACACGGCCCAGGCCATGGCACTGCGGGCAAGCGCCCTGGGGCGTGTTCGGAGAAAAGTCTTCGGCGTACAGCATCGCTTGCCCGGGCGGGTAATGGCCAGCGCGGGAATAGAGCATGCGGATCGAACTGGACAAGGTGGTCACGCTACCCACCGAGGAACGTGCACTCGGCGTGCCGCGTTGC  >  NC_002947/3476138‑3476428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.