| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3608915 = | 42 (0.850) | 4 (0.080) | 4/248 | NT | 8.4% | coding (202/2265 nt) | PP_3182 | GGDEF domain‑containing protein |
| ? | NC_002947 | 3608979 = | 47 (0.980) | coding (138/2265 nt) | PP_3182 | GGDEF domain‑containing protein | |||||
AAAGCCGCCGCCCGACAGAATGCACTGTCGGCCAAGGCCATCGAGCACCTGAACCTGGCCAGCATCGTGGGCGAAAACCTCCGACAGCTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3609065‑3608915‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAAG > NC_002947/3608979‑3609125 AAAGCCGCCGCCCGACAGAATGCACTGTCGGCCAAGGCCATCGAGCACCTGAACCTGGCCAGCATCGTGGGCGAAACCCTCCGACAGCTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCCA < 8:57530/149‑1AAAGCCGCCGCCCGACAGAATGCACTGTCGGCCAAGGCCATCGAGCACCTGAACCTGGCCAGCATCGTGGGCGAAAACCTCCGACAGCTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCC > 5:236389/1‑148 ACAGCTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCCAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGT > 7:284934/1‑141 ACAGCTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCCAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGT < 8:284934/141‑1 CTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCCAAGCTGTCGGAGGTTTTCGCCCACGATGCTTGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACA < 4:86946/126‑1 CTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCCAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACA > 3:86946/1‑126 CAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGAT > 1:307902/1‑148 AAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAA < 1:269915/149‑1 GCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAAG > 5:43413/1‑148 AAAGCCGCCGCCCGACAGAATGCACTGTCGGCCAAGGCCATCGAGCACCTGAACCTGGCCAGCATCGTGGGCGAAAACCTCCGACAGCTTGTCGACCGCGCCCAGGCGGTGGGTCGTGTGACCCAGGACGACATGAAAGCGCGGCGCCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3609065‑3608915‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAAG > NC_002947/3608979‑3609125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |