New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3608915 =42 (0.850)4 (0.080) 4/248 NT 8.4% coding (202/2265 nt) PP_3182 GGDEF domain‑containing protein
?NC_002947 3608979 = 47 (0.980)coding (138/2265 nt) PP_3182 GGDEF domain‑containing protein

CTGGCCGCTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAAGCA  >  NC_002947/3608836‑3609127
                                                                                                                                               |                                                                                                                                                    
ctggcCGCTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTc                                                                                                                                                  >  3:1534/1‑148 (MQ=255)
ctggcCGCTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTc                                                                                                                                                  <  4:1534/148‑1 (MQ=255)
ctggcCGCTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCg                                                                                                                                                 >  8:169300/1‑149 (MQ=255)
ctggcCGCTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCg                                                                                                                                                 >  4:139905/1‑149 (MQ=255)
   gcCGCTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGa                                                                                                                                               <  3:308908/148‑1 (MQ=255)
      acagaatgcactgtcggccaaggccatcgagcacctgaacctggccagcatcgtgggcgaaaacctccgacagCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGt                                                                                                                                                   <  8:284934‑M1/68‑1 (MQ=255)
      acagaatgcactgtcggccaaggccatcgagcacctgaacctggccagcatcgtgggcgaaaacctccgacagCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGt                                                                                                                                                   >  7:284934‑M1/74‑141 (MQ=255)
       cTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGttt                                                                                                                                          >  2:113106/1‑149 (MQ=255)
       cTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGttt                                                                                                                                          >  2:278471/1‑149 (MQ=255)
                      gtcggtcgTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTg                                                                                                                           >  6:172989/1‑149 (MQ=255)
                                 aGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAg                                                                                                                <  7:113551/149‑1 (MQ=255)
                                   gCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAg                                                                                                                <  2:144377/147‑1 (MQ=255)
                                   gCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAg                                                                                                                >  1:144377/1‑147 (MQ=255)
                                     tCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGc                                                                                                            >  2:208763/1‑149 (MQ=255)
                                       aaGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCt                                                                                                           <  7:169300/148‑1 (MQ=255)
                                        aGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCg                                                                                                         <  5:166557/149‑1 (MQ=255)
                                             ttGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGc                                                                                                    >  4:50447/1‑149 (MQ=255)
                                                    caGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGcc                                                                                             <  1:17723/149‑1 (MQ=255)
                                                      gggTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGa                                                                                           >  6:236389/1‑149 (MQ=255)
                                                        gTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACa                                                                                         <  7:22696/149‑1 (MQ=255)
                                                         tCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTTGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAg                                                                                        <  7:6757/149‑1 (MQ=255)
                                                             ctgcCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGt                                                                                       <  3:139905/146‑1 (MQ=255)
                                                             ctgcCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTg                                                                                      <  5:172989/147‑1 (MQ=255)
                                                               gcCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATg                                                                                                      <  3:389/129‑1 (MQ=255)
                                                               gcCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATg                                                                                                      >  4:389/1‑129 (MQ=255)
                                                                ccAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCAtt                                                                                  <  2:175547/148‑1 (MQ=255)
                                                                   gggtGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTGCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGGTCGATGGCCTTGGCCGACAGTGCATTCTGt                                                                              <  6:7521/146‑1 (MQ=255)
                                                                    gCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTc                                                                             >  1:205009/1‑149 (MQ=255)
                                                                     cTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCg                                                                            >  7:69470/1‑149 (MQ=255)
                                                                       gAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCggg                                                                          >  2:262126/1‑149 (MQ=255)
                                                                         ggTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGggcg                                                                        >  6:41374/1‑149 (MQ=255)
                                                                           acagcttgtcgaccgcgcccaggcggtgggtcgtgtgacccaggacgacatgaaagcgcggcgccaagCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGt                                                                              >  7:284934‑M2/69‑141 (MQ=255)
                                                                           acagcttgtcgaccgcgcccaggcggtgggtcgtgtgacccaggacgacatgaaagcgcggcgccaagCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGt                                                                              <  8:284934‑M2/73‑1 (MQ=255)
                                                                               cttgtcgaccgcgcccaggcggtgggtcgtgtgacccaggacgacatgaaagcgcggcgccaagCTGTCGGAGGTTTTCGCCCACGATGCTTGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACa                                                                                         <  4:86946‑M2/62‑1 (MQ=255)
                                                                               cttgtcgaccgcgcccaggcggtgggtcgtgtgacccaggacgacatgaaagcgcggcgccaagCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACa                                                                                         >  3:86946‑M2/65‑126 (MQ=255)
                                                                                 TGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGGTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCttt                                                                <  8:57530‑M1/149‑1 (MQ=255)
                                                                                  GGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCttt                                                                >  5:236389‑M1/1‑148 (MQ=255)
                                                                                     gccgcGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTgg                                                            >  1:308307/1‑149 (MQ=255)
                                                                                     gccgcGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGGGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTgg                                                            <  7:57530/149‑1 (MQ=255)
                                                                                            tttCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGt                                                     >  7:115178/1‑149 (MQ=255)
                                                                                                  gtcgtcCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTggg                                                           <  8:220983/137‑1 (MQ=255)
                                                                                                  gtcgtcCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTggg                                                           >  7:220983/1‑137 (MQ=255)
                                                                                                      tcCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCa                                           <  8:125857/149‑1 (MQ=255)
                                                                                                        cTGGGTCACACGACCCACCGCCTGGGCGGGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGTGTGACGTGCAGCCCCCaga                                         <  3:50447/149‑1 (MQ=255)
                                                                                                           ggTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCTGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAgaga                                       >  2:274633/1‑148 (MQ=255)
                                                                                                            gTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCACAGaaa                                     <  1:262126/149‑1 (MQ=255)
                                                                                                             tCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAg                                    >  6:3913/1‑149 (MQ=255)
                                                                                                             tCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAg                                    <  8:115178/149‑1 (MQ=255)
                                                                                                             tCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAg                                    >  1:85531/1‑149 (MQ=255)
                                                                                                                 acGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGggcggcgg                                                                    <  4:159183/113‑1 (MQ=255)
                                                                                                                 acGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCa                                <  2:205009/149‑1 (MQ=255)
                                                                                                                   gACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAgg                              >  2:269915/1‑149 (MQ=255)
                                                                                                                        aCCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGTTGGCCTTGGCCGACAGTGCATTCTGTc                                                                             <  4:31766/97‑1 (MQ=255)
                                                                                                                        aCCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTc                                                                             >  3:31766/1‑97 (MQ=255)
                                                                                                                            ccTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCag                                          >  5:289596/1‑128 (MQ=255)
                                                                                                                            ccTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCag                                          <  6:289596/128‑1 (MQ=255)
                                                                                                                                ggCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACaga                 <  5:3913/149‑1 (MQ=255)
                                                                                                                                      gTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCAt             >  7:103189/1‑147 (MQ=255)
                                                                                                                                       tCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAg          <  8:103189/149‑1 (MQ=255)
                                                                                                                                        cGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAg          >  5:282/1‑148 (MQ=255)
                                                                                                                                         gACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTgg                                                            <  3:192860/97‑1 (MQ=255)
                                                                                                                                         gACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTgg                                                            >  4:192860/1‑97 (MQ=255)
                                                                                                                                          aCAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGa        >  2:309175/1‑148 (MQ=255)
                                                                                                                                           caagCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGAt       >  1:307902‑M2/5‑148 (MQ=255)
                                                                                                                                            aagCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATaa     <  1:269915‑M2/146‑1 (MQ=255)
                                                                                                                                              gCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAAg    >  5:43413‑M2/2‑148 (MQ=255)
                                                                                                                                               cTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAAGCa  <  1:208763/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
CTGGCCGCTAGCAGCCGGCCTTGTCGGTCGTACAGGCTCAAGCGCTTGAACACAGGGTCTGCTGCCAGGCTGAGGTTGCCTTGGCGCCGCGCTTTCATGTCGTCCTGGGTCACACGACCCACCGCCTGGGCGCGGTCGACAAGCTGTCGGAGGTTTTCGCCCACGATGCTGGCCAGGTTCAGGTGCTCGATGGCCTTGGCCGACAGTGCATTCTGTCGGGCGGCGGCTTTCTGGGTGACGTGCAGCCCCCAGAGAAAGGCCAGGGTCGCTGCACAGAGCATCAGGATAAGCA  >  NC_002947/3608836‑3609127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.