New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3629073 =	29 (0.590)	4 (0.080)	4/246	NT	12.0%	coding (863/1125 nt)	PP_3199	monooxygenase
	?	NC_002947	3629119 =	31 (0.650)					coding (909/1125 nt)	PP_3199	monooxygenase

CATGCCTGCCCCCTGCCCCAGGTGTGGCGTGGTGGCATGGGC‑‑‑‑GGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3629119‑3629073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGTTTCGAGCGCTGCAAGTTCATCAGCGAAATGTCCCTGCTGGCAGGTGTGAAGGAAATC  >  NC_002947/3629119‑3629263                                                                                                                                                                                                      CATGCCTGCCCCCTGCCCCAGGTGTGGCGTGGTGGCATGGGC‑‑‑‑GGCATGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGTTTCGAGCGCTGC                                               >  2:101125/1‑147   TGCCTGCCCCCTGCCCCAGGTGTGGCGTGGTGGCATGGGC‑‑‑‑GGCATGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGT                                                           <  7:256495/133‑1   TGCCTGCCCCCTGCCCCAGGTGTGGCGTGGTGGCATGGGC‑‑‑‑GGCATGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGT                                                           >  8:256495/1‑133        GCCCCCTGCCCCAGGTGTGGCGTGGTGGCATGGGCGGCAGGCATGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGTTTCGAGCGCTGCAAGTT                                          >  6:295077/1‑149                                                GCATGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGTTTCGAGCGCTGCAAGTTCATCAGCGAAATGTCCCTGCTGGCAGGTGTGAAGGAAATC  >  4:184078/1‑149                                                GCATGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGTTTCGAGCGCTGCAAGTTCATCAGCGAAATGTCCCTGCTGGCAGGTG             <  5:26728/138‑1                                                GCATGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGTTTCGAGCGCTGCAAGTTCATCAGCGAAATGTCCCTGCTGGCAGGTG             >  6:26728/1‑138                                                                                                                                                                                                      CATGCCTGCCCCCTGCCCCAGGTGTGGCGTGGTGGCATGGGC‑‑‑‑GGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3629119‑3629073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatGGCCATTGAGGACGCCGTGGTGCTCGCCGAGGAGCTCACCGCGGGTGGCAGCCTCGACGCGCAATTGCAGCGTTTCATGGGCCGGCGTTTCGAGCGCTGCAAGTTCATCAGCGAAATGTCCCTGCTGGCAGGTGTGAAGGAAATC  >  NC_002947/3629119‑3629263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.