| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3661203 = | 42 (0.850) | 5 (0.110) | 5/242 | NT | 11.7% | coding (492/945 nt) | PP_3225 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| ? | NC_002947 | 3661254 = | 36 (0.770) | coding (441/945 nt) | PP_3225 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
AGCAACTGCCCGGTCTATGGGTCAAGGACGCCGACTGGCGCCTGACCCCGCTGGCCCCGTTGCGTGGTCGCACCCTGGGCATCCTCGGCTTCGGCAGTATCGGCCAGAGCCTGGCGCGCAAGGCCGTGGCCCTGGGGCTTCGGGTTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3661354‑3661203‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctggccGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCAC > NC_002947/3661254‑3661394 AGCAACTGCCCGGTCTATGGGTCAAGGACGCCGACTGGCGCCTGACCCCGCTGGCCCCGTTGCGTGGTCGCACCCTGGGCATCCTCGGCTTCGGCAGTATCGGCCAGAGCCTGGCGCGCAAGGCCGTGGCCCAGGGGCTTAGCGTTCTG > 7:232281/1‑149 GCAACTGCCCGGTCTATGGGTCAAGTACGCCGACTGGCGCCTGACCCCGCTGGCCCCGTTGCGTGGTCGCACCCTGGGCATCCTCGGCTTCGGCAGTATCGGCCAGAGCCTGGCGCGCAAGGCCGTGGCCCTGGGGCTTCGGGTTCTGG > 3:252253/1‑149 ATCGGCCAGAGCCTGGCGCGCAAGGCCGTGGCCCTGGGGCTTCGGGTTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGG > 7:110799/1‑147 GGCCAGAGCCTGGCGCGCAAGGCCGTGGCCCTGGGGCTTCGGGTTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTT > 4:121239/1‑149 GCCAGAGCCTGGCGCGCAAGGCCGTGGCCCTGGGGCTTCGGGTTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTG > 8:64321/1‑149 CGTGGCCCTGGGGCTTCGGGTTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAA < 7:64321/149‑1 GGGCTTCGGGTTCTGGCCGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGC < 8:110799/147‑1 ctcaGGCCGATACTGCCGAAGCCCAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGCCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCAC < 8:199252/145‑1 AGCAACTGCCCGGTCTATGGGTCAAGGACGCCGACTGGCGCCTGACCCCGCTGGCCCCGTTGCGTGGTCGCACCCTGGGCATCCTCGGCTTCGGCAGTATCGGCCAGAGCCTGGCGCGCAAGGCCGTGGCCCTGGGGCTTCGGGTTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3661354‑3661203‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctggccGATACTGCCGAAGCCGAGGATGCCCAGGGTGCGACCACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCAC > NC_002947/3661254‑3661394 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |