| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3693203 = | 34 (0.690) | 3 (0.070) | 3/236 | NT | 8.1% | coding (423/1044 nt) | PP_3259 | acyl‑CoA dehydrogenase‑related protein |
| ? | NC_002947 | 3693283 = | 37 (0.810) | coding (343/1044 nt) | PP_3259 | acyl‑CoA dehydrogenase‑related protein | |||||
GCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGTGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTTCCGGTGCCTTGCAGATCGATCGCGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3693360‑3693203‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgcgctgTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGCCAGGATCGCCAAGGCATCGGTATGGCCCTCATAGAGCTTGGCCAGTGCCAGGTCACAGCC > NC_002947/3693283‑3693427 GCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGTGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTTCCGGTGCCTTGCAGATCGAT > 5:50442/1‑149 ATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTTCCGGTGCCTTGCAGATCGATCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGG > 1:166859/1‑149 AGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTTCCGGTGCCTTGCAGATCGATCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGC > 5:209879/1‑149 CCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTTCCGGTGCCTTGCAGATCGATCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGC < 2:166859/149‑1 CGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGCCAGGATCGCCAAGGCATCGGTATGGCCCTCATAGAGCTTGGCCAGTGCCAGGTCACAGC < 4:77783/149‑1 GCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGCCAGGATCGCCAAGGCATCGGTATGGCCCTCATAGAGCTTGGCCAGTGCCAGGTCACAGCC < 6:142078/149‑1 GCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGCCAGGATCGCCAAGGCATCGGTATGGCCCTCATAGAGCTTGGCCAGTGCCAGGTCACAGCC < 6:209879/149‑1 CTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGCCAGGATCGCCA < 1:56110/99‑1 CTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGCCAGGATCGCCA > 2:56110/1‑99 GCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGTGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTTCCGGTGCCTTGCAGATCGATCGCGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3693360‑3693203‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgcgctgTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCGTCGTTGGCGTGGTGCGCTGCGCCGCATTCCGCCAGGATCGCCAAGGCATCGGTATGGCCCTCATAGAGCTTGGCCAGTGCCAGGTCACAGCC > NC_002947/3693283‑3693427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |