| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3752195 = | 47 (0.950) | 4 (0.090) | 4/240 | NT | 8.5% | coding (1688/2823 nt) | PP_3316 | chaperone‑associated ATPase |
| ? | NC_002947 | 3752250 = | 42 (0.910) | coding (1633/2823 nt) | PP_3316 | chaperone‑associated ATPase | |||||
GGCCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTGCGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3752347‑3752195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcaACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGACAG > NC_002947/3752250‑3752388 GGCCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTGCGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGG > 3:278745/1‑149GGCCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTGCGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGG > 4:153320/1‑149 GCCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTGCGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGC > 1:284487/1‑149 GCCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTGCGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGC < 3:29341/149‑1 CCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTGCGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGCG < 4:252647/149‑1 GTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAG > 3:156566/1‑142 GTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAG < 4:156566/142‑1 TTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTT > 1:100918/1‑117 TTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTT < 2:100918/117‑1 GCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGACAG < 4:153826/147‑1 GGCCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTGCGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAATGCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3752347‑3752195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcaACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGACAG > NC_002947/3752250‑3752388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |