New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3752195 =47 (0.950)4 (0.090) 4/240 NT 8.5% coding (1688/2823 nt) PP_3316 chaperone‑associated ATPase
?NC_002947 3752250 = 42 (0.910)coding (1633/2823 nt) PP_3316 chaperone‑associated ATPase

ACCTCGGTGCTGCCCGAGCCGCGCTCGCGCTCCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGACAG  >  NC_002947/3752105‑3752388
                                                                                                                                                 |                                                                                                                                          
aCCTCGGTGCTGCCCGAGCCGCGCTCGCGCTCCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACt                                                                                                                                          <  8:111927/148‑1 (MQ=255)
     ggTGCTGCCCGAGCCGCGCTCGCGCTCCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTg                                                                                                                                      <  1:17398/147‑1 (MQ=255)
     ctcgatcaggctgccgcccgcgtcaagttatcggcgacggcgcgtccggttgcggtgcaggaaatggagtcggagttgcaccagtTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAAc                                                                                                                                           <  4:156566‑M1/57‑1 (MQ=255)
     ctcgatcaggctgccgcccgcgtcaagttatcggcgacggcgcgtccggttgcggtgcaggaaatggagtcggagttgcaccagtTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAAc                                                                                                                                           >  3:156566‑M1/86‑142 (MQ=255)
            cccGAGCCGCGCTCGCGCTCCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGa                                                                                                                             <  2:42734/149‑1 (MQ=255)
               gAGCCGCGCTCGCGCTCCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTc                                                                                                                          >  8:77432/1‑149 (MQ=255)
                  ccGCGCTCGCGCTCCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCAt                                                                                                                       >  5:303391/1‑149 (MQ=255)
                      gctcgcgctcCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTc                                                                                                                    >  6:134622/1‑148 (MQ=255)
                      gctcgcgctcCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTc                                                                                                                    <  5:134622/148‑1 (MQ=255)
                       ctcgcgctcCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCt                                                                                                                  <  3:10406/149‑1 (MQ=255)
                            gctcCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGt                                                                                                                                       >  8:35835/1‑123 (MQ=255)
                            gctcCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGc                                                                                                                                     >  8:294695/1‑125 (MQ=255)
                            gctcCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGc                                                                                                                                     <  7:294695/125‑1 (MQ=255)
                             aagttatcggcgacggcgcgtccggttgcggtgcaggaaatggagtcggagttgcaccagtTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCaa                                                                                                                                            >  1:100918‑M1/62‑117 (MQ=255)
                             aagttatcggcgacggcgcgtccggttgcggtgcaggaaatggagtcggagttgcaccagtTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCaa                                                                                                                                            <  2:100918‑M1/56‑1 (MQ=255)
                               cccACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGc                                                                                                           >  3:71136/1‑148 (MQ=255)
                                ccACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCaa                                                                                                         >  4:278745/1‑149 (MQ=255)
                                   ctcctcGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCg                                                                                                      >  3:280833/1‑149 (MQ=255)
                                    tcctcGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCgg                                                                                                     >  1:295203/1‑149 (MQ=255)
                                    tcctcGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCg                                                                                                      >  1:148212/1‑148 (MQ=255)
                                    tcctcGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCg                                                                                                      >  1:153035/1‑148 (MQ=255)
                                      ctcGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGAc                                                                                                   <  2:153035/149‑1 (MQ=255)
                                      ctcGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGAc                                                                                                   <  2:148212/149‑1 (MQ=255)
                                         gACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGAcgcg                                                                                                >  6:206808/1‑149 (MQ=255)
                                         gACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGAcgc                                                                                                 <  5:237979/148‑1 (MQ=255)
                                            ccGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTg                                                                                                                                         <  6:26871/105‑1 (MQ=255)
                                             cGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGt                                                                                            <  8:66942/149‑1 (MQ=255)
                                              gctgctTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTc                                                                                           >  7:19471/1‑149 (MQ=255)
                                                  ctTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGcc                                                                                        <  5:206808/148‑1 (MQ=255)
                                                  ctTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCg                                                                                       <  8:19471/149‑1 (MQ=255)
                                                           ggCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCTTATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGa                                                                              >  1:222240/1‑149 (MQ=255)
                                                           ggCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGa                                                                              <  4:280833/149‑1 (MQ=255)
                                                                         cGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGcc                                                                >  2:202543/1‑149 (MQ=255)
                                                                           aCGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCt                                                               >  2:312771/1‑148 (MQ=255)
                                                                                cTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATc                                                           >  5:215182/1‑147 (MQ=255)
                                                                                   gCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAg                                                        <  4:71136/147‑1 (MQ=255)
                                                                                   gCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGc                                                       <  7:77432/148‑1 (MQ=255)
                                                                                   gCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCACAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAg                                                        >  6:321644/1‑147 (MQ=255)
                                                                                       aTCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGa                                                    <  1:202543/147‑1 (MQ=255)
                                                                                        gttgcgccgcgagcaggactacgcggcttcgcgcaagcaatatgacaatgcggcgcaACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAg                                                        <  4:156566‑M2/85‑1 (MQ=255)
                                                                                        gttgcgccgcgagcaggactacgcggcttcgcgcaagcaatatgacaatgcggcgcaACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAg                                                        >  3:156566‑M2/58‑142 (MQ=255)
                                                                                         ttgcgccgcgagcaggactacgcggcttcgcgcaagcaatatgacaatgcggcgcaACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACtt                                                                                >  1:100918‑M2/57‑117 (MQ=255)
                                                                                         ttgcgccgcgagcaggactacgcggcttcgcgcaagcaatatgacaatgcggcgcaACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACtt                                                                                <  2:100918‑M2/61‑1 (MQ=255)
                                                                                            CGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATgg                                             <  4:252647‑M1/149‑1 (MQ=255)
                                                                                             GCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGc                                            <  3:29341‑M1/149‑1 (MQ=255)
                                                                                             GCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGc                                            >  1:284487‑M1/1‑149 (MQ=255)
                                                                                              CCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGcc                                           >  4:153320‑M1/1‑149 (MQ=255)
                                                                                              CCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGcc                                           >  3:278745‑M1/1‑149 (MQ=255)
                                                                                                        atatTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCgg                                   >  1:19297/1‑147 (MQ=255)
                                                                                                                        gCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGAc                 <  3:252647/149‑1 (MQ=255)
                                                                                                                        gCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGAc                 <  6:215182/149‑1 (MQ=255)
                                                                                                                          cgcgTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACg                >  1:80198/1‑148 (MQ=255)
                                                                                                                           gcgTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCTACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGAt                                               >  2:238368/1‑116 (MQ=255)
                                                                                                                           gcgTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCTACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGAt                                               <  1:238368/116‑1 (MQ=255)
                                                                                                                           gcgTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACg                >  3:153826/1‑147 (MQ=255)
                                                                                                                            cgTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAg             <  2:19297/149‑1 (MQ=255)
                                                                                                                              tAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCg           <  2:295203/149‑1 (MQ=255)
                                                                                                                                    tGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCgg                                   >  6:31794/1‑119 (MQ=255)
                                                                                                                                    tGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCgg                                   <  5:31794/119‑1 (MQ=255)
                                                                                                                                    tGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGa     >  8:175461/1‑149 (MQ=255)
                                                                                                                                      cTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGa     <  7:175461/147‑1 (MQ=255)
                                                                                                                                      cTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGa     <  2:80198/147‑1 (MQ=255)
                                                                                                                                         gcggcgcaACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGACAg  <  4:153826‑M2/139‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                          
ACCTCGGTGCTGCCCGAGCCGCGCTCGCGCTCCCACTCCTCGACCCGCTGCTTGAGTTCGGCCTCCGTGGCTTCGACGCGCTTGCTGATCTGCGCCGCATTGTCATATTGCTTGCGCGAAGCCGCGTAGTCCTGCTCGCGGCGCAACTGGTGCAACTCCGACTCCATTTCCTGCACCGCAACCGGACGCGCCGTCGCCGATAACTTGACGCGGGCGGCAGCCTGATCGAGCAGATCGATGGCCTTGTCCGGCAGAAAGCGCGCGCTGACGTAGCGGTCGGACAG  >  NC_002947/3752105‑3752388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.