| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4038846 | 61 (1.240) | 4 (0.090) | 4/242 | NT | 6.3% | coding (645/849 nt) | PP_3559 | glycine betaine ABC transporter permease |
| ? | NC_002947 | = 4038866 | 62 (1.330) | coding (665/849 nt) | PP_3559 | glycine betaine ABC transporter permease | |||||
CTGATCTACGCCCTGCCGCCGCTGGTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4038694‑4038846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcatgACCGACTGGTTGAGCCCGGCCATGATGCTTGGTAGCGCCAGGGGCAGGGCGATGCGCCGCAACCGCTGCCAGCGGCTTGCGCCAAGGCCGTGTGCGGCCTGCAGCAACGAGGGGTCGATCTGGCTCAGGCCCAGTTCGGTCAAC < NC_002947/4038866‑4038723 CTGATCTACGCCCTGCCGCCGCTGGTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCAT < 8:143006/149‑1 TGATCTACGCCCTGCCGCCGCTGGTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCAT > 8:209835/1‑148 ATCTACGCCCTGCCGCCGCTGGTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATC < 8:288841/147‑1 ATCTACGCCCTGCCGCCGCTGGTGCGGGTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATC < 1:99962/147‑1 CCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGACC < 1:254267/106‑1 CCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGACC > 2:254267/1‑106 CAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGACCGACTGGTTGAGCCCGGCCATGATGCTTGGTA < 7:130397/136‑1 CAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGACCGACTGGTTGAGCCCGGCCATGATGCTTGGTA > 8:130397/1‑136 CTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGACCGACTGGTTGAGCCCGGCCATG < 5:296674/90‑1 CTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGACCGACTGGTTGAGCCCGGCCATG > 6:296674/1‑90 TCATGACCGACTGGTTGAGCCCGGCCATGATGCTTGGTAGCGCCAGGGGCAGGGCGATGCGCCGCAACCGCTGCCAGCGGCTTGCGCCAAGGCCGTGTGCGGCCTGCAGCAACGAGGGGTCGATCTGGCTCAGGCCCAGTTCGGTCAAC < 4:72776/149‑1 TGACCGACTGGTTGAGCCCGGCCATGATGCTTGGTAGCGCCAGGGGCAGGGCGATGCGCCGCAACCGCTGCCAGCGGCTTGCGCCAAGGCCGTGTGCGGCCTGCAGCAACGAGGGGTCGATCT > 1:49937/1‑123 TGACCGACTGGTTGAGCCCGGCCATGATGCTTGGTAGCGCCAGGGGCAGGGCGATGCGCCGCAACCGCTGCCAGCGGCTTGCGCCAAGGCCGTGTGCGGCCTGCAGCAACGAGGGGTCGATCT < 2:49937/123‑1 CTGATCTACGCCCTGCCGCCGCTGGTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4038694‑4038846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcatgACCGACTGGTTGAGCCCGGCCATGATGCTTGGTAGCGCCAGGGGCAGGGCGATGCGCCGCAACCGCTGCCAGCGGCTTGCGCCAAGGCCGTGTGCGGCCTGCAGCAACGAGGGGTCGATCTGGCTCAGGCCCAGTTCGGTCAAC < NC_002947/4038866‑4038723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |